Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.53□□□□□ -2
GABPAQ06546 GLYCAM1-201ENST00000546596 285 ntBASIC2.53□□□□□ -2
GABPAQ06546 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.53□□□□□ -2
GABPAQ06546 MIR3913-1-201ENST00000577744 102 ntBASIC2.53□□□□□ -2
GABPAQ06546 AC024619.4-201ENST00000580924 316 ntBASIC2.53□□□□□ -2
GABPAQ06546 AC098848.2-201ENST00000588023 330 ntBASIC2.53□□□□□ -2
GABPAQ06546 AC005261.5-201ENST00000596280 355 ntBASIC2.53□□□□□ -2
GABPAQ06546 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.53□□□□□ -2
GABPAQ06546 CU459211.1-201ENST00000635667 749 ntBASIC2.53□□□□□ -2
GABPAQ06546 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.53□□□□□ -2
GABPAQ06546 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
GABPAQ06546 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
GABPAQ06546 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.53□□□□□ -2.01
GABPAQ06546 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.53□□□□□ -2.01
GABPAQ06546 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
GABPAQ06546 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
GABPAQ06546 RNA5SP181-201ENST00000410246 98 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 RNU6-1025P-201ENST00000410629 104 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 RNA5SP111-201ENST00000411386 101 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.52□□□□□ -2.01
GABPAQ06546 AC007560.1-201ENST00000426912 237 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.52□□□□□ -2.01
GABPAQ06546 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.52□□□□□ -2.01
GABPAQ06546 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.52□□□□□ -2.01
GABPAQ06546 HMGN2P10-201ENST00000448085 265 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.52□□□□□ -2.01
GABPAQ06546 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.52□□□□□ -2.01
GABPAQ06546 AC098591.2-201ENST00000510152 315 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 RNU6-1183P-201ENST00000517054 60 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.52□□□□□ -2.01
GABPAQ06546 AC009902.1-201ENST00000519351 183 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
GABPAQ06546 RANP3-201ENST00000530970 276 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.52□□□□□ -2.01
GABPAQ06546 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.52□□□□□ -2.01
GABPAQ06546 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.52□□□□□ -2.01
GABPAQ06546 AL121821.2-201ENST00000556081 394 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.52□□□□□ -2.01
GABPAQ06546 AC007151.1-201ENST00000572774 483 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 MIR4782-201ENST00000577987 79 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 MIR1273C-201ENST00000578669 77 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.52□□□□□ -2.01
GABPAQ06546 AC245014.2-201ENST00000603689 287 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 Z84480.1-201ENST00000605131 311 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 AC246785.4-201ENST00000605374 287 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 AC126118.1-201ENST00000607744 628 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 AC010378.1-201ENST00000619270 362 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 MIR6132-201ENST00000622083 109 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 AC024940.5-201ENST00000622889 474 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 MIR7515-201ENST00000637837 67 ntBASIC2.52□□□□□ -2.01
GABPAQ06546 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.52□□□□□ -2.01
GABPAQ06546 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.52□□□□□ -2.01
GABPAQ06546 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
GABPAQ06546 SNORD116-9-201ENST00000384000 95 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 SNORD116-3-201ENST00000384287 95 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 SNORD116-7-201ENST00000384404 95 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 SNORD116-5-201ENST00000384462 95 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 MIR504-201ENST00000385065 83 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
GABPAQ06546 USP9YP6-201ENST00000413550 854 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.51□□□□□ -2.01
GABPAQ06546 AL445646.1-201ENST00000431784 216 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 MTATP6P16-201ENST00000434543 526 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 MTCO2P16-201ENST00000436962 677 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
GABPAQ06546 AL031667.1-201ENST00000440222 725 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 KATNBL1P3-201ENST00000443475 909 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 FDX1P2-201ENST00000450769 375 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 RPL31P3-201ENST00000458430 332 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 TRBV1-201ENST00000476502 284 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 RPL23AP70-201ENST00000483361 460 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 AC116562.3-201ENST00000506136 177 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 ARL2BPP4-201ENST00000506854 471 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 RBBP4P6-201ENST00000508098 202 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.51□□□□□ -2.01
GABPAQ06546 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.51□□□□□ -2.01
GABPAQ06546 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
GABPAQ06546 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.51□□□□□ -2.01
GABPAQ06546 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.51□□□□□ -2.01
GABPAQ06546 AC068587.5-201ENST00000528506 175 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 AL356057.1-201ENST00000533798 831 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 AL157871.3-201ENST00000557231 293 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.51□□□□□ -2.01
GABPAQ06546 AC006362.1-201ENST00000567392 174 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 AC103810.1-201ENST00000579873 453 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.51□□□□□ -2.01
GABPAQ06546 AL670379.4-201ENST00000605279 254 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 AL139286.2-201ENST00000606838 396 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 AC098614.4-201ENST00000607601 462 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 AC006566.1-201ENST00000608943 513 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 AC012409.4-201ENST00000612923 249 ntBASIC2.51□□□□□ -2.01
GABPAQ06546 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
GABPAQ06546 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.51□□□□□ -2.01
GABPAQ06546 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
GABPAQ06546 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.5□□□□□ -2.01
GABPAQ06546 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
GABPAQ06546 Y_RNA.33-201ENST00000362591 102 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 Y_RNA.77-201ENST00000362962 107 ntBASIC2.5□□□□□ -2.01
GABPAQ06546 RNU6-179P-201ENST00000363350 107 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms