Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.26□□□□□ -2.37
PRKDCP78527 SNORA62.5-201ENST00000516634 120 ntBASIC0.26□□□□□ -2.37
PRKDCP78527 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.26□□□□□ -2.37
PRKDCP78527 AC010738.1-201ENST00000604970 987 ntBASIC0.26□□□□□ -2.37
PRKDCP78527 AP005229.2-201ENST00000609980 697 ntBASIC0.26□□□□□ -2.37
PRKDCP78527 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.26□□□□□ -2.37
PRKDCP78527 RNU6-1305P-201ENST00000364353 104 ntBASIC0.26□□□□□ -2.37
PRKDCP78527 MIR325-201ENST00000385260 98 ntBASIC0.26□□□□□ -2.37
PRKDCP78527 AC023141.4-201ENST00000412031 328 ntBASIC0.26□□□□□ -2.37
PRKDCP78527 AC245047.4-201ENST00000433189 144 ntBASIC0.26□□□□□ -2.37
PRKDCP78527 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.26□□□□□ -2.37
PRKDCP78527 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
PRKDCP78527 AL157398.1-201ENST00000452981 186 ntBASIC0.26□□□□□ -2.37
PRKDCP78527 AC098862.1-201ENST00000504991 413 ntBASIC0.26□□□□□ -2.37
PRKDCP78527 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.26□□□□□ -2.37
PRKDCP78527 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
PRKDCP78527 AC005832.3-201ENST00000537929 631 ntBASIC0.26□□□□□ -2.37
PRKDCP78527 AC007151.1-201ENST00000572774 483 ntBASIC0.26□□□□□ -2.37
PRKDCP78527 FAM60CP-201ENST00000591086 664 ntBASIC0.26□□□□□ -2.37
PRKDCP78527 MIR8065-201ENST00000620577 100 ntBASIC0.26□□□□□ -2.37
PRKDCP78527 U1.36-201ENST00000620684 176 ntBASIC0.26□□□□□ -2.37
PRKDCP78527 Y_RNA.35-201ENST00000362601 101 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 AC083875.1-201ENST00000419509 405 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.25□□□□□ -2.37
PRKDCP78527 RPL7P29-201ENST00000437151 728 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 DDX3P2-201ENST00000446138 111 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 AC092685.1-201ENST00000447960 1243 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 RPL31P3-201ENST00000458430 332 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 RNA5SP404-201ENST00000517118 132 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 AC087821.2-201ENST00000637086 450 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 RNU1-124P-201ENST00000363861 145 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 MIR214-201ENST00000385214 110 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 RPL23AP95-201ENST00000426806 265 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 MTND4P6-201ENST00000438297 472 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 MTCO1P44-201ENST00000441935 243 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
PRKDCP78527 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.25□□□□□ -2.37
PRKDCP78527 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.25□□□□□ -2.37
PRKDCP78527 AC087481.2-201ENST00000565492 330 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 AL137246.1-201ENST00000607072 977 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 DUXAP10-204ENST00000612052 616 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.25□□□□□ -2.37
PRKDCP78527 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.25□□□□□ -2.37
PRKDCP78527 MTCYBP3-201ENST00000445588 1137 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 AL163195.1-201ENST00000496941 348 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.25□□□□□ -2.37
PRKDCP78527 AC002545.1-201ENST00000592511 181 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.25□□□□□ -2.37
PRKDCP78527 AC080013.4-201ENST00000607624 649 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 AL359854.1-201ENST00000614203 1594 ntBASIC0.25□□□□□ -2.37
PRKDCP78527 RNA5SP368-201ENST00000364298 116 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 RNU6-244P-201ENST00000391028 104 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 RNU2-21P-201ENST00000410368 188 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.24□□□□□ -2.37
PRKDCP78527 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.24□□□□□ -2.37
PRKDCP78527 AL049714.1-201ENST00000466686 347 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 AC114982.1-201ENST00000469402 321 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.24□□□□□ -2.37
PRKDCP78527 AC105036.1-201ENST00000566222 271 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 ZNF92P3-201ENST00000596594 954 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 AC240442.1-201ENST00000616055 283 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 Y_RNA.18-201ENST00000362461 102 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.24□□□□□ -2.37
PRKDCP78527 MTCO3P4-201ENST00000419236 787 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.24□□□□□ -2.37
PRKDCP78527 MTND5P14-201ENST00000441481 1267 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC0.24□□□□□ -2.37
PRKDCP78527 AC004923.2-201ENST00000529649 369 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 RNU5A-1-201ENST00000362698 116 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 RNU4-23P-201ENST00000362839 140 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 MIR100-201ENST00000385259 80 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 RNU4-78P-201ENST00000410940 126 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.24□□□□□ -2.37
PRKDCP78527 MED14P1-201ENST00000430517 648 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 RAC1P7-201ENST00000445367 377 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.24□□□□□ -2.37
PRKDCP78527 RNA5SP67-201ENST00000516422 131 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.24□□□□□ -2.37
PRKDCP78527 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.24□□□□□ -2.37
PRKDCP78527 AC010900.2-201ENST00000604508 210 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 AC084824.5-201ENST00000612009 413 ntBASIC0.24□□□□□ -2.37
PRKDCP78527 SNORA9.1-201ENST00000362412 131 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 RNU6-700P-201ENST00000391043 107 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.23□□□□□ -2.37
PRKDCP78527 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.23□□□□□ -2.37
PRKDCP78527 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.23□□□□□ -2.37
PRKDCP78527 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.23□□□□□ -2.37
PRKDCP78527 ZNF680P1-201ENST00000436625 1469 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 MIR1267-201ENST00000408723 78 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 AC078974.1-201ENST00000411597 223 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.23□□□□□ -2.37
PRKDCP78527 CR769776.1-201ENST00000441254 787 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.23□□□□□ -2.37
PRKDCP78527 VPS26AP1-201ENST00000483197 979 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.23□□□□□ -2.37
PRKDCP78527 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
PRKDCP78527 DSTNP4-201ENST00000399472 474 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms