Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 HLFP1-201ENST00000402375 499 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 MIR1183-201ENST00000408856 89 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 RNU6-101P-201ENST00000410323 104 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.44□□□□□ -1.86
CLRN1P58418 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.44□□□□□ -1.86
CLRN1P58418 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.44□□□□□ -1.86
CLRN1P58418 EIF4EP2-201ENST00000422816 654 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 RPL7P2-201ENST00000427639 268 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 CHEK2P4-201ENST00000450340 246 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.44□□□□□ -1.86
CLRN1P58418 MTATP6P7-201ENST00000453315 681 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.44□□□□□ -1.86
CLRN1P58418 UBE2CP3-201ENST00000502715 450 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.44□□□□□ -1.86
CLRN1P58418 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.44□□□□□ -1.86
CLRN1P58418 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.44□□□□□ -1.86
CLRN1P58418 RNA5SP309-201ENST00000516670 106 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.44□□□□□ -1.86
CLRN1P58418 YPEL5P3-201ENST00000547227 352 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 LINC00933-203ENST00000559812 219 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.44□□□□□ -1.86
CLRN1P58418 AL606490.9-201ENST00000603331 271 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.44□□□□□ -1.86
CLRN1P58418 AL731566.2-201ENST00000618971 317 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.44□□□□□ -1.86
CLRN1P58418 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.44□□□□□ -1.86
CLRN1P58418 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLRN1P58418 ZNF72P-201ENST00000425869 1908 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.44□□□□□ -1.86
CLRN1P58418 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.44□□□□□ -1.86
CLRN1P58418 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CLRN1P58418 AL672296.1-201ENST00000427780 2158 ntBASIC3.44□□□□□ -1.86
CLRN1P58418 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.43□□□□□ -1.86
CLRN1P58418 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLRN1P58418 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLRN1P58418 MTND5P9-201ENST00000503854 1755 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLRN1P58418 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLRN1P58418 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.43□□□□□ -1.86
CLRN1P58418 ZNF299P-201ENST00000406845 1804 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CLRN1P58418 Y_RNA.47-201ENST00000362697 108 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 Y_RNA.149-201ENST00000363558 117 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 SNORA70.2-201ENST00000364506 135 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 RNU6-336P-201ENST00000364891 107 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 RNU6-898P-201ENST00000365627 104 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 RNU1-73P-201ENST00000383971 164 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 RNU6-823P-201ENST00000391042 103 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 U3.37-201ENST00000408528 213 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 DPH3P2-201ENST00000422618 250 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 HMGN2P30-201ENST00000423237 256 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 AL117339.2-201ENST00000430475 180 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 AC112492.4-201ENST00000456549 352 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 U8.20-201ENST00000459445 131 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 RPS4XP13-201ENST00000483219 789 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 AC114801.2-201ENST00000503825 781 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.43□□□□□ -1.86
CLRN1P58418 Y_RNA.721-201ENST00000517207 102 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.43□□□□□ -1.86
CLRN1P58418 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.43□□□□□ -1.86
CLRN1P58418 MIR5696-201ENST00000578474 85 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.43□□□□□ -1.86
CLRN1P58418 AC008962.1-201ENST00000605729 304 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 MIR486-1-201ENST00000612171 68 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 AC010205.1-201ENST00000616668 449 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 MIR4272-201ENST00000635924 64 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 AC090740.1-201ENST00000623193 2262 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLRN1P58418 AC008669.1-201ENST00000565823 2178 ntBASIC3.43□□□□□ -1.86
CLRN1P58418 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLRN1P58418 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLRN1P58418 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.43□□□□□ -1.86
CLRN1P58418 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CLRN1P58418 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CLRN1P58418 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CLRN1P58418 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLRN1P58418 AC106871.1-201ENST00000568324 3102 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 SNORD50.1-201ENST00000362987 71 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 RNU6-884P-201ENST00000363889 107 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 RNU4-42P-201ENST00000364738 142 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 AC068538.1-201ENST00000376856 336 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 Y_RNA.424-201ENST00000384063 103 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 MIR518D-201ENST00000385014 87 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 MIR199A2-201ENST00000385289 110 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 RPS29P13-201ENST00000402041 169 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLRN1P58418 RPL26P27-201ENST00000414397 437 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 TMEM167AP1-201ENST00000423409 219 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.42□□□□□ -1.86
CLRN1P58418 AC098831.1-201ENST00000440661 216 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 HMGB3P8-201ENST00000449709 577 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.42□□□□□ -1.86
CLRN1P58418 HMGN2P16-201ENST00000456802 261 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 RPS29P27-201ENST00000463711 170 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.42□□□□□ -1.86
CLRN1P58418 NDUFB4P9-201ENST00000511646 388 ntBASIC3.42□□□□□ -1.86
CLRN1P58418 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms