Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.16□□□□□ -2.06
LIM2P55344 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
LIM2P55344 MTCO3P28-201ENST00000513351 515 ntBASIC2.16□□□□□ -2.06
LIM2P55344 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.16□□□□□ -2.06
LIM2P55344 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.16□□□□□ -2.06
LIM2P55344 RANP3-201ENST00000530970 276 ntBASIC2.16□□□□□ -2.06
LIM2P55344 AP000873.5-201ENST00000533906 236 ntBASIC2.16□□□□□ -2.06
LIM2P55344 AL512310.1-201ENST00000548639 172 ntBASIC2.16□□□□□ -2.06
LIM2P55344 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.16□□□□□ -2.06
LIM2P55344 MIR548AC-201ENST00000585049 88 ntBASIC2.16□□□□□ -2.06
LIM2P55344 AC098848.2-201ENST00000588023 330 ntBASIC2.16□□□□□ -2.06
LIM2P55344 AL138889.2-201ENST00000603883 242 ntBASIC2.16□□□□□ -2.06
LIM2P55344 AC006566.1-201ENST00000608943 513 ntBASIC2.16□□□□□ -2.06
LIM2P55344 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.16□□□□□ -2.06
LIM2P55344 AC024940.5-201ENST00000622889 474 ntBASIC2.16□□□□□ -2.06
LIM2P55344 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.16□□□□□ -2.06
LIM2P55344 AL157786.1-207ENST00000627771 695 ntBASIC2.16□□□□□ -2.06
LIM2P55344 AC135776.4-201ENST00000624300 1904 ntBASIC2.16□□□□□ -2.06
LIM2P55344 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
LIM2P55344 AC005336.3-201ENST00000623833 2679 ntBASIC2.15□□□□□ -2.06
LIM2P55344 ZNF720P1-201ENST00000562403 1939 ntBASIC2.15□□□□□ -2.06
LIM2P55344 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.15□□□□□ -2.06
LIM2P55344 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
LIM2P55344 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
LIM2P55344 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
LIM2P55344 MIR454-201ENST00000390180 115 ntBASIC2.15□□□□□ -2.07
LIM2P55344 AL591416.1-201ENST00000404015 867 ntBASIC2.15□□□□□ -2.07
LIM2P55344 RNU4-53P-201ENST00000410828 140 ntBASIC2.15□□□□□ -2.07
LIM2P55344 AC114491.1-201ENST00000416095 246 ntBASIC2.15□□□□□ -2.07
LIM2P55344 AC007560.1-201ENST00000426912 237 ntBASIC2.15□□□□□ -2.07
LIM2P55344 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.15□□□□□ -2.07
LIM2P55344 AL627311.1-201ENST00000431514 115 ntBASIC2.15□□□□□ -2.07
LIM2P55344 MTATP6P16-201ENST00000434543 526 ntBASIC2.15□□□□□ -2.07
LIM2P55344 AC233279.1-201ENST00000455300 423 ntBASIC2.15□□□□□ -2.07
LIM2P55344 AC080013.2-201ENST00000460866 323 ntBASIC2.15□□□□□ -2.07
LIM2P55344 EIF4EP3-201ENST00000498782 656 ntBASIC2.15□□□□□ -2.07
LIM2P55344 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.15□□□□□ -2.07
LIM2P55344 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.15□□□□□ -2.07
LIM2P55344 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.15□□□□□ -2.07
LIM2P55344 AC091965.2-201ENST00000512324 613 ntBASIC2.15□□□□□ -2.07
LIM2P55344 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.15□□□□□ -2.07
LIM2P55344 SNORA31.11-201ENST00000516528 139 ntBASIC2.15□□□□□ -2.07
LIM2P55344 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.15□□□□□ -2.07
LIM2P55344 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.15□□□□□ -2.07
LIM2P55344 MTCYBP20-201ENST00000524239 1129 ntBASIC2.15□□□□□ -2.07
LIM2P55344 FAM92A1P1-201ENST00000528023 890 ntBASIC2.15□□□□□ -2.07
LIM2P55344 AP000889.1-201ENST00000530968 660 ntBASIC2.15□□□□□ -2.07
LIM2P55344 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.15□□□□□ -2.07
LIM2P55344 AC008521.1-201ENST00000587471 187 ntBASIC2.15□□□□□ -2.07
LIM2P55344 AL356280.1-201ENST00000603614 379 ntBASIC2.15□□□□□ -2.07
LIM2P55344 MIR98-201ENST00000606724 119 ntBASIC2.15□□□□□ -2.07
LIM2P55344 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.15□□□□□ -2.07
LIM2P55344 AC005332.10-201ENST00000612725 619 ntBASIC2.15□□□□□ -2.07
LIM2P55344 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.15□□□□□ -2.07
LIM2P55344 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.15□□□□□ -2.07
LIM2P55344 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.15□□□□□ -2.07
LIM2P55344 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.15□□□□□ -2.07
LIM2P55344 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.15□□□□□ -2.07
LIM2P55344 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
LIM2P55344 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.15□□□□□ -2.07
LIM2P55344 Y_RNA.201-201ENST00000364052 96 ntBASIC2.14□□□□□ -2.07
LIM2P55344 RNU6-74P-201ENST00000384235 107 ntBASIC2.14□□□□□ -2.07
LIM2P55344 RPL31P35-201ENST00000431058 377 ntBASIC2.14□□□□□ -2.07
LIM2P55344 AL445687.1-201ENST00000439946 251 ntBASIC2.14□□□□□ -2.07
LIM2P55344 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.14□□□□□ -2.07
LIM2P55344 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.14□□□□□ -2.07
LIM2P55344 RNU6-956P-201ENST00000458868 103 ntBASIC2.14□□□□□ -2.07
LIM2P55344 AC018437.1-201ENST00000492214 406 ntBASIC2.14□□□□□ -2.07
LIM2P55344 AC116655.1-201ENST00000508324 901 ntBASIC2.14□□□□□ -2.07
LIM2P55344 AC107222.1-201ENST00000510899 637 ntBASIC2.14□□□□□ -2.07
LIM2P55344 AC008716.1-201ENST00000511084 513 ntBASIC2.14□□□□□ -2.07
LIM2P55344 RNU6-123P-201ENST00000516163 102 ntBASIC2.14□□□□□ -2.07
LIM2P55344 RNU6-1220P-201ENST00000517126 108 ntBASIC2.14□□□□□ -2.07
LIM2P55344 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.14□□□□□ -2.07
LIM2P55344 MTCO2P4-201ENST00000517968 247 ntBASIC2.14□□□□□ -2.07
LIM2P55344 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.14□□□□□ -2.07
LIM2P55344 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.14□□□□□ -2.07
LIM2P55344 AP000889.2-201ENST00000532684 490 ntBASIC2.14□□□□□ -2.07
LIM2P55344 AL356057.1-201ENST00000533798 831 ntBASIC2.14□□□□□ -2.07
LIM2P55344 MIR3913-1-201ENST00000577744 102 ntBASIC2.14□□□□□ -2.07
LIM2P55344 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.14□□□□□ -2.07
LIM2P55344 MIR3117-201ENST00000584034 78 ntBASIC2.14□□□□□ -2.07
LIM2P55344 AL121992.2-201ENST00000606262 256 ntBASIC2.14□□□□□ -2.07
LIM2P55344 AC010678.1-201ENST00000614118 713 ntBASIC2.14□□□□□ -2.07
LIM2P55344 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
LIM2P55344 U6.42-201ENST00000618440 107 ntBASIC2.14□□□□□ -2.07
LIM2P55344 AC099842.1-201ENST00000619919 596 ntBASIC2.14□□□□□ -2.07
LIM2P55344 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.14□□□□□ -2.07
LIM2P55344 AL359854.1-201ENST00000614203 1594 ntBASIC2.14□□□□□ -2.07
LIM2P55344 AL109809.4-201ENST00000603520 2185 ntBASIC2.13□□□□□ -2.07
LIM2P55344 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
LIM2P55344 RNU6-1280P-201ENST00000365211 107 ntBASIC2.13□□□□□ -2.07
LIM2P55344 Y_RNA.367-201ENST00000365544 101 ntBASIC2.13□□□□□ -2.07
LIM2P55344 SNORD116-9-201ENST00000384000 95 ntBASIC2.13□□□□□ -2.07
LIM2P55344 SNORD116-3-201ENST00000384287 95 ntBASIC2.13□□□□□ -2.07
LIM2P55344 SNORD116-7-201ENST00000384404 95 ntBASIC2.13□□□□□ -2.07
LIM2P55344 SNORD116-5-201ENST00000384462 95 ntBASIC2.13□□□□□ -2.07
LIM2P55344 SNORA80E-201ENST00000384744 137 ntBASIC2.13□□□□□ -2.07
LIM2P55344 MIR147B-201ENST00000390185 80 ntBASIC2.13□□□□□ -2.07
LIM2P55344 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms