Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
CLCNKAP51800 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
CLCNKAP51800 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLCNKAP51800 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLCNKAP51800 FTLP6-201ENST00000355274 422 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLCNKAP51800 SNORA72.1-201ENST00000363485 129 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 Y_RNA.157-201ENST00000363638 102 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 RNU6-522P-201ENST00000364497 107 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 RNU6-140P-201ENST00000384566 108 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 SNORA44-201ENST00000384584 132 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 AL162578.1-201ENST00000406202 378 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 RNU6-1148P-201ENST00000410992 104 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 RPL7P10-201ENST00000417407 739 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 HMGN2P30-201ENST00000423237 256 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 AC092047.1-201ENST00000424997 240 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 AC093151.1-201ENST00000427711 313 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 AC022018.1-201ENST00000430685 241 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 AL360271.2-201ENST00000447710 161 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.96□□□□□ -1.94
CLCNKAP51800 RPL12P25-201ENST00000455592 494 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 AL590639.1-201ENST00000456484 337 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.96□□□□□ -1.94
CLCNKAP51800 AC098799.2-201ENST00000509466 868 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.96□□□□□ -1.94
CLCNKAP51800 AC112206.3-201ENST00000514578 389 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 RNU6-928P-201ENST00000516876 104 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.96□□□□□ -1.94
CLCNKAP51800 AC107016.2-201ENST00000547968 190 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.96□□□□□ -1.94
CLCNKAP51800 AL157871.3-201ENST00000557231 293 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 AC106782.4-201ENST00000568264 210 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 AC005730.3-201ENST00000583067 366 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 MIR548AC-201ENST00000585049 88 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.96□□□□□ -1.94
CLCNKAP51800 AC092807.2-201ENST00000609367 243 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.96□□□□□ -1.94
CLCNKAP51800 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CLCNKAP51800 GABRG2-229ENST00000641017 3628 ntBASIC2.96□□□□□ -1.94
CLCNKAP51800 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CLCNKAP51800 AC008669.1-201ENST00000565823 2178 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 MTND5P19-201ENST00000424872 1794 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLCNKAP51800 ZNF519P1-201ENST00000449011 1626 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 RNU6-371P-201ENST00000364283 108 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 RNU6-1303P-201ENST00000364841 107 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 SNORA75B-201ENST00000384053 137 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 RNU6-393P-201ENST00000384475 107 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 RNU6-851P-201ENST00000384565 107 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 MIR301A-201ENST00000385261 86 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 RPS4XP7-201ENST00000406274 780 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 RNA5SP344-201ENST00000411081 104 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 BX682237.1-201ENST00000415016 335 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 RPL21P90-201ENST00000415692 466 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCNKAP51800 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCNKAP51800 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.95□□□□□ -1.94
CLCNKAP51800 AL645937.1-202ENST00000421799 937 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 ZNF863P-201ENST00000426746 417 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.95□□□□□ -1.94
CLCNKAP51800 AC010099.1-201ENST00000455434 375 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.95□□□□□ -1.94
CLCNKAP51800 RN7SL75P-201ENST00000461926 281 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 AC117440.1-201ENST00000474107 571 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 RN7SL20P-201ENST00000488827 297 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCNKAP51800 RNU2-69P-201ENST00000516061 100 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 RPL7P20-201ENST00000520308 745 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCNKAP51800 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.95□□□□□ -1.94
CLCNKAP51800 AC011471.1-201ENST00000585766 187 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.95□□□□□ -1.94
CLCNKAP51800 AC073539.2-201ENST00000597113 165 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 AC078899.3-201ENST00000599065 212 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.95□□□□□ -1.94
CLCNKAP51800 AC004852.3-201ENST00000614131 326 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 AL136221.1-201ENST00000621449 509 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 AC002064.3-201ENST00000623448 346 ntBASIC2.95□□□□□ -1.94
CLCNKAP51800 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLCNKAP51800 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CLCNKAP51800 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.95□□□□□ -1.94
CLCNKAP51800 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLCNKAP51800 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLCNKAP51800 Y_RNA.33-201ENST00000362591 102 ntBASIC2.94□□□□□ -1.94
CLCNKAP51800 SNORD3E-201ENST00000362899 217 ntBASIC2.94□□□□□ -1.94
CLCNKAP51800 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLCNKAP51800 RNU6-217P-201ENST00000384164 104 ntBASIC2.94□□□□□ -1.94
CLCNKAP51800 RNU6-45P-201ENST00000384471 107 ntBASIC2.94□□□□□ -1.94
CLCNKAP51800 RNA5SP219-201ENST00000390940 113 ntBASIC2.94□□□□□ -1.94
CLCNKAP51800 RNU4-26P-201ENST00000410270 107 ntBASIC2.94□□□□□ -1.94
CLCNKAP51800 RNU6-1025P-201ENST00000410629 104 ntBASIC2.94□□□□□ -1.94
CLCNKAP51800 RNU2-68P-201ENST00000410878 191 ntBASIC2.94□□□□□ -1.94
CLCNKAP51800 RPL21P111-201ENST00000418453 477 ntBASIC2.94□□□□□ -1.94
CLCNKAP51800 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.94□□□□□ -1.94
CLCNKAP51800 SNRPEP9-201ENST00000436794 238 ntBASIC2.94□□□□□ -1.94
CLCNKAP51800 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.94□□□□□ -1.94
CLCNKAP51800 RNU6-1208P-201ENST00000459588 107 ntBASIC2.94□□□□□ -1.94
CLCNKAP51800 DYNLL1P5-201ENST00000467158 270 ntBASIC2.94□□□□□ -1.94
CLCNKAP51800 AC083904.1-201ENST00000487828 231 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms