Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC119751.7-201ENST00000600494 245 ntBASIC2.34□□□□□ -2.03
SFTPBP07988 AL356575.1-201ENST00000603008 283 ntBASIC2.34□□□□□ -2.03
SFTPBP07988 AC087752.4-201ENST00000605911 462 ntBASIC2.34□□□□□ -2.03
SFTPBP07988 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.34□□□□□ -2.03
SFTPBP07988 RN7SL853P-201ENST00000617250 223 ntBASIC2.34□□□□□ -2.03
SFTPBP07988 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.34□□□□□ -2.03
SFTPBP07988 AC011155.2-201ENST00000623202 216 ntBASIC2.34□□□□□ -2.03
SFTPBP07988 AC092656.1-203ENST00000624134 423 ntBASIC2.34□□□□□ -2.03
SFTPBP07988 AC138627.2-201ENST00000624202 601 ntBASIC2.34□□□□□ -2.03
SFTPBP07988 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.34□□□□□ -2.03
SFTPBP07988 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
SFTPBP07988 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SFTPBP07988 MTND5P17-201ENST00000418405 1603 ntBASIC2.34□□□□□ -2.04
SFTPBP07988 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.34□□□□□ -2.04
SFTPBP07988 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SFTPBP07988 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SFTPBP07988 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
SFTPBP07988 RNU6-181P-201ENST00000363225 107 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 RNU6-1097P-201ENST00000363586 107 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 RNU6-371P-201ENST00000364283 108 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 RNU6-384P-201ENST00000364900 104 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SFTPBP07988 RNU6-72P-201ENST00000384285 79 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SFTPBP07988 U3.37-201ENST00000408528 213 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 RN7SKP284-201ENST00000411002 343 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 OR6C66P-201ENST00000414917 930 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 PIGFP2-201ENST00000421400 651 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 PGBD4P6-201ENST00000421501 610 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SFTPBP07988 MTCYBP5-201ENST00000423752 1135 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 MTND4P32-201ENST00000437189 1237 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 HIGD1AP2-201ENST00000446367 280 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 RPS29P15-201ENST00000458329 171 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.33□□□□□ -2.04
SFTPBP07988 DYNLL1P5-201ENST00000467158 270 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.33□□□□□ -2.04
SFTPBP07988 ARL2BPP4-201ENST00000506854 471 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 AC117522.3-201ENST00000507974 584 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 AC114781.4-201ENST00000513707 639 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 SNORA31.15-201ENST00000516771 132 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 RNU6-445P-201ENST00000516949 107 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 RNU6-430P-201ENST00000517078 107 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.33□□□□□ -2.04
SFTPBP07988 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.33□□□□□ -2.04
SFTPBP07988 MIR4528-201ENST00000577763 90 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 MIR5571-201ENST00000577998 113 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 MIR3124-201ENST00000582636 67 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 AL138889.2-201ENST00000603883 242 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.33□□□□□ -2.04
SFTPBP07988 CR381653.2-201ENST00000624041 768 ntBASIC2.33□□□□□ -2.04
SFTPBP07988 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.33□□□□□ -2.04
SFTPBP07988 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.33□□□□□ -2.04
SFTPBP07988 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SFTPBP07988 AL136360.1-201ENST00000503377 1900 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 RNU6-1287P-201ENST00000362914 107 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 RNU6-1060P-201ENST00000384664 107 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 MIR454-201ENST00000390180 115 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SFTPBP07988 RNU6-550P-201ENST00000391057 101 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 RNA5SP184-201ENST00000411071 108 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.32□□□□□ -2.04
SFTPBP07988 AC097463.2-201ENST00000421074 142 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.32□□□□□ -2.04
SFTPBP07988 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.32□□□□□ -2.04
SFTPBP07988 CALM1P1-201ENST00000442082 433 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 RPL32P28-201ENST00000443577 397 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 NDUFB1P2-201ENST00000449477 176 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SFTPBP07988 EEF1B2P7-201ENST00000451177 676 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 C1DP4-201ENST00000455429 424 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.32□□□□□ -2.04
SFTPBP07988 RPL22P13-201ENST00000493291 347 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.32□□□□□ -2.04
SFTPBP07988 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.32□□□□□ -2.04
SFTPBP07988 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.32□□□□□ -2.04
SFTPBP07988 AC117532.1-201ENST00000514638 323 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 RNU1-86P-201ENST00000516108 154 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 SNORD27.1-201ENST00000516319 72 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 Y_RNA.688-201ENST00000516565 95 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 RNU1-107P-201ENST00000516617 154 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.32□□□□□ -2.04
SFTPBP07988 MTND2P38-201ENST00000522536 667 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SFTPBP07988 AC079600.2-201ENST00000550076 130 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.32□□□□□ -2.04
SFTPBP07988 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.32□□□□□ -2.04
SFTPBP07988 MTCYBP33-201ENST00000575007 1130 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.32□□□□□ -2.04
SFTPBP07988 MIR4775-201ENST00000581168 75 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 MIR4672-201ENST00000583126 81 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.32□□□□□ -2.04
SFTPBP07988 AL049779.4-201ENST00000604500 156 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 AC099842.1-201ENST00000619919 596 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.32□□□□□ -2.04
SFTPBP07988 AL390237.1-201ENST00000404226 1415 ntBASIC2.32□□□□□ -2.04
SFTPBP07988 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.32□□□□□ -2.04
SFTPBP07988 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.32□□□□□ -2.04
SFTPBP07988 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms