Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF40AO75400 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF40AO75400 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF40AO75400 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PRPF40AO75400 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
PRPF40AO75400 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF40AO75400 RNU6-227P-201ENST00000362865 103 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 RNU6-778P-201ENST00000363269 103 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 RNU6-527P-201ENST00000363425 104 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 Y_RNA.153-201ENST00000363615 91 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 RNU4-42P-201ENST00000364738 142 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 RNU6-898P-201ENST00000365627 104 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 Y_RNA.401-201ENST00000383965 117 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 MIR568-201ENST00000385036 95 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 RNU6-823P-201ENST00000391042 103 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 MIR888-201ENST00000401186 77 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.58□□□□□ -1.68
PRPF40AO75400 NUTF2P7-201ENST00000453086 375 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 RNU6-635P-201ENST00000516651 102 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.58□□□□□ -1.68
PRPF40AO75400 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.58□□□□□ -1.68
PRPF40AO75400 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.58□□□□□ -1.68
PRPF40AO75400 AC124312.5-201ENST00000604451 268 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 MIR1244-1-201ENST00000612829 85 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 AC010205.1-201ENST00000616668 449 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 AC090617.7-201ENST00000623952 126 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 AC068724.3-201ENST00000625906 87 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 MIR1244-3-201ENST00000635744 85 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 MIR1244-2-201ENST00000636449 85 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 MIR1244-4-202ENST00000636813 85 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 U2.21-201ENST00000637295 81 ntBASIC4.58□□□□□ -1.68
PRPF40AO75400 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.58□□□□□ -1.68
PRPF40AO75400 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.57□□□□□ -1.68
PRPF40AO75400 CUL1P1-201ENST00000509510 2425 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
PRPF40AO75400 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PRPF40AO75400 U3.6-201ENST00000363622 211 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 SNORD14.1-201ENST00000365609 90 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 Y_RNA.452-201ENST00000384202 108 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 RPS26P8-201ENST00000393490 348 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PRPF40AO75400 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.57□□□□□ -1.68
PRPF40AO75400 COX6B1P7-201ENST00000430845 235 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.57□□□□□ -1.68
PRPF40AO75400 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.57□□□□□ -1.68
PRPF40AO75400 AC110794.1-201ENST00000505816 425 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 AC099522.1-202ENST00000514718 367 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 RNU1-61P-201ENST00000516107 151 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 AC022616.4-201ENST00000522985 181 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 AC025884.1-201ENST00000556034 378 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 AC004817.2-201ENST00000561794 651 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.57□□□□□ -1.68
PRPF40AO75400 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.57□□□□□ -1.68
PRPF40AO75400 AC016727.2-201ENST00000603988 621 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 PRR13P7-201ENST00000605538 430 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 AL121655.1-201ENST00000605811 308 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 uc_338.32-201ENST00000615087 172 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 MIR8059-201ENST00000620427 81 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PRPF40AO75400 HSPA8P1-201ENST00000425843 1833 ntBASIC4.57□□□□□ -1.68
PRPF40AO75400 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
PRPF40AO75400 AC008725.1-201ENST00000605123 2263 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PRPF40AO75400 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
PRPF40AO75400 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.56□□□□□ -1.68
PRPF40AO75400 MIR423-201ENST00000362201 94 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 Y_RNA.152-201ENST00000363578 100 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 RNU6-595P-201ENST00000363944 107 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 Z98749.2-208ENST00000381646 500 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 RNU6-1035P-201ENST00000384477 107 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 RPS29P13-201ENST00000402041 169 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.56□□□□□ -1.68
PRPF40AO75400 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.56□□□□□ -1.68
PRPF40AO75400 RPS3AP46-201ENST00000448352 682 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 HMGN2P16-201ENST00000456802 261 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 RNA5SP310-201ENST00000459084 116 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 RNU7-169P-201ENST00000459456 61 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 AC020593.1-201ENST00000507399 299 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 SNORA31.18-201ENST00000517043 134 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 AC011602.1-201ENST00000546484 331 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 AC007224.1-201ENST00000564410 144 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 AC006600.1-201ENST00000572529 153 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 MIR5696-201ENST00000578474 85 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.56□□□□□ -1.68
PRPF40AO75400 AC006006.1-201ENST00000603082 144 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.56□□□□□ -1.68
PRPF40AO75400 MIR7151-201ENST00000617477 60 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.56□□□□□ -1.68
PRPF40AO75400 AC244205.2-202ENST00000635781 342 ntBASIC4.56□□□□□ -1.68
PRPF40AO75400 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.56□□□□□ -1.68
PRPF40AO75400 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PRPF40AO75400 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PRPF40AO75400 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PRPF40AO75400 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
PRPF40AO75400 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PRPF40AO75400 MTND5P27-201ENST00000428871 1720 ntBASIC4.55□□□□□ -1.68
PRPF40AO75400 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PRPF40AO75400 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms