Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
SSSCA1O60232 RNU6-733P-201ENST00000410759 104 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 AL451054.2-201ENST00000420896 202 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 EIF1P1-201ENST00000421436 341 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 JTBP1-201ENST00000441314 247 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 AL929288.2-201ENST00000446368 407 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.46□□□□□ -2.34
SSSCA1O60232 RPS27P22-201ENST00000478056 241 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 RAP1BP2-201ENST00000478270 544 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 AL163540.1-201ENST00000485382 386 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.46□□□□□ -2.34
SSSCA1O60232 AC109329.1-201ENST00000518744 317 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 AP003392.2-201ENST00000527269 208 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.46□□□□□ -2.34
SSSCA1O60232 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.46□□□□□ -2.34
SSSCA1O60232 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.46□□□□□ -2.34
SSSCA1O60232 SUB1P4-201ENST00000566062 339 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 RPL30P11-203ENST00000598995 310 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.46□□□□□ -2.34
SSSCA1O60232 AC004908.3-201ENST00000610248 625 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 AC084824.5-201ENST00000612009 413 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 OR4G3P-201ENST00000633500 913 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 AL133216.2-202ENST00000634512 349 ntBASIC0.46□□□□□ -2.34
SSSCA1O60232 MTND4P16-201ENST00000466108 1367 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
SSSCA1O60232 RNA5SP99-201ENST00000364020 114 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 MIR222-201ENST00000384992 110 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 SRIP3-201ENST00000413200 219 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 ELOCP14-201ENST00000428070 331 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 MTCO3P5-201ENST00000433620 714 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.45□□□□□ -2.34
SSSCA1O60232 MTND1P28-201ENST00000435623 950 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 ELOCP7-201ENST00000439968 331 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 FDX1P2-201ENST00000450769 375 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 USP9YP34-201ENST00000453983 808 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 RN7SL429P-201ENST00000479090 223 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 RN7SL489P-201ENST00000486185 223 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.45□□□□□ -2.34
SSSCA1O60232 RN7SL327P-201ENST00000488659 223 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.45□□□□□ -2.34
SSSCA1O60232 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.45□□□□□ -2.34
SSSCA1O60232 RNU6-197P-201ENST00000516680 100 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 DEFB108E-201ENST00000524692 240 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 AC004812.1-201ENST00000540773 146 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 AC015712.3-201ENST00000559380 164 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.45□□□□□ -2.34
SSSCA1O60232 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.45□□□□□ -2.34
SSSCA1O60232 Z82243.1-201ENST00000609432 473 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 AL132822.1-201ENST00000617063 513 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 RN7SL853P-201ENST00000617250 223 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 AC138627.2-201ENST00000624202 601 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 AC080188.3-201ENST00000624842 748 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.45□□□□□ -2.34
SSSCA1O60232 AC100821.1-201ENST00000523153 2479 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 AC009541.1-201ENST00000438279 2662 ntBASIC0.45□□□□□ -2.34
SSSCA1O60232 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
SSSCA1O60232 HAUS6P2-201ENST00000433254 2404 ntBASIC0.44□□□□□ -2.34
SSSCA1O60232 MIR373-201ENST00000362273 69 ntBASIC0.44□□□□□ -2.34
SSSCA1O60232 RNU6-819P-201ENST00000364116 107 ntBASIC0.44□□□□□ -2.34
SSSCA1O60232 Y_RNA.245-201ENST00000364493 95 ntBASIC0.44□□□□□ -2.34
SSSCA1O60232 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.44□□□□□ -2.34
SSSCA1O60232 MIR7-1-201ENST00000384871 110 ntBASIC0.44□□□□□ -2.34
SSSCA1O60232 AL117342.1-201ENST00000404861 406 ntBASIC0.44□□□□□ -2.34
SSSCA1O60232 AC132479.1-201ENST00000449160 144 ntBASIC0.44□□□□□ -2.34
SSSCA1O60232 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
SSSCA1O60232 RPL26P26-201ENST00000480251 434 ntBASIC0.44□□□□□ -2.34
SSSCA1O60232 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.44□□□□□ -2.34
SSSCA1O60232 RNU6-528P-201ENST00000516926 100 ntBASIC0.44□□□□□ -2.34
SSSCA1O60232 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.44□□□□□ -2.34
SSSCA1O60232 AL355598.1-201ENST00000604169 202 ntBASIC0.44□□□□□ -2.34
SSSCA1O60232 AL583856.2-201ENST00000606298 543 ntBASIC0.44□□□□□ -2.34
SSSCA1O60232 AL158211.4-201ENST00000606988 584 ntBASIC0.44□□□□□ -2.34
SSSCA1O60232 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.44□□□□□ -2.34
SSSCA1O60232 ZNF849P-201ENST00000594711 1566 ntBASIC0.44□□□□□ -2.34
SSSCA1O60232 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
SSSCA1O60232 RNU6-23P-201ENST00000363283 107 ntBASIC0.43□□□□□ -2.34
SSSCA1O60232 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.43□□□□□ -2.34
SSSCA1O60232 AC010153.1-201ENST00000432862 727 ntBASIC0.43□□□□□ -2.34
SSSCA1O60232 AL050341.1-201ENST00000447743 313 ntBASIC0.43□□□□□ -2.34
SSSCA1O60232 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.43□□□□□ -2.34
SSSCA1O60232 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC0.43□□□□□ -2.34
SSSCA1O60232 CYCSP23-201ENST00000519781 313 ntBASIC0.43□□□□□ -2.34
SSSCA1O60232 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.43□□□□□ -2.34
SSSCA1O60232 AC011604.1-201ENST00000545978 196 ntBASIC0.43□□□□□ -2.34
SSSCA1O60232 AC233266.2-201ENST00000567067 528 ntBASIC0.43□□□□□ -2.34
SSSCA1O60232 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.43□□□□□ -2.34
SSSCA1O60232 AP000942.3-201ENST00000603702 160 ntBASIC0.43□□□□□ -2.34
SSSCA1O60232 MZT1P2-201ENST00000604387 248 ntBASIC0.43□□□□□ -2.34
SSSCA1O60232 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.43□□□□□ -2.34
SSSCA1O60232 AL589994.2-201ENST00000621124 579 ntBASIC0.43□□□□□ -2.34
SSSCA1O60232 RNU6-657P-201ENST00000383904 107 ntBASIC0.42□□□□□ -2.34
SSSCA1O60232 RNU6-546P-201ENST00000383991 107 ntBASIC0.42□□□□□ -2.34
SSSCA1O60232 RNU6-1065P-201ENST00000384513 106 ntBASIC0.42□□□□□ -2.34
SSSCA1O60232 MIR608-201ENST00000384820 100 ntBASIC0.42□□□□□ -2.34
SSSCA1O60232 FGF7P8-201ENST00000402994 292 ntBASIC0.42□□□□□ -2.34
SSSCA1O60232 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.42□□□□□ -2.34
SSSCA1O60232 RNU2-68P-201ENST00000410878 191 ntBASIC0.42□□□□□ -2.34
SSSCA1O60232 HMGN1P14-201ENST00000412459 517 ntBASIC0.42□□□□□ -2.34
SSSCA1O60232 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.42□□□□□ -2.34
SSSCA1O60232 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms