Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 UBL5P2-201ENST00000583788 219 ntBASIC3.23□□□□□ -1.89
SMAD6O43541 AF038458.1-201ENST00000588406 262 ntBASIC3.23□□□□□ -1.89
SMAD6O43541 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.23□□□□□ -1.89
SMAD6O43541 CYP2C61P-201ENST00000604072 290 ntBASIC3.23□□□□□ -1.89
SMAD6O43541 AC006329.2-201ENST00000611491 394 ntBASIC3.23□□□□□ -1.89
SMAD6O43541 AL132822.1-201ENST00000617063 513 ntBASIC3.23□□□□□ -1.89
SMAD6O43541 AC091925.1-201ENST00000623204 462 ntBASIC3.23□□□□□ -1.89
SMAD6O43541 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
SMAD6O43541 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMAD6O43541 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SMAD6O43541 TPTE2P4-201ENST00000258589 1605 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 MTND4P1-201ENST00000457501 1466 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.22□□□□□ -1.89
SMAD6O43541 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SMAD6O43541 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SMAD6O43541 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.22□□□□□ -1.89
SMAD6O43541 RNU6-989P-201ENST00000362756 107 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 RNU6-960P-201ENST00000364056 120 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 SNORA14A-201ENST00000364773 135 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 MIR128-1-201ENST00000384921 82 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 MIR483-201ENST00000385070 76 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SMAD6O43541 RNU6-550P-201ENST00000391057 101 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 RNU4-46P-201ENST00000410818 138 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 AL139396.1-201ENST00000421137 167 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 RAC1P6-201ENST00000423911 575 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 RPL23AP69-201ENST00000431134 458 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.22□□□□□ -1.89
SMAD6O43541 RPL23AP22-201ENST00000437556 453 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.22□□□□□ -1.89
SMAD6O43541 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.22□□□□□ -1.89
SMAD6O43541 MTND1P17-201ENST00000448961 204 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.22□□□□□ -1.89
SMAD6O43541 MTCO3P10-201ENST00000455912 772 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.22□□□□□ -1.89
SMAD6O43541 Y_RNA.653-201ENST00000459091 95 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.22□□□□□ -1.89
SMAD6O43541 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.22□□□□□ -1.89
SMAD6O43541 MTCYBP40-201ENST00000509390 1135 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 AC098591.2-201ENST00000510152 315 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 RNU6-1137P-201ENST00000517073 99 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.22□□□□□ -1.89
SMAD6O43541 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.22□□□□□ -1.89
SMAD6O43541 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.22□□□□□ -1.89
SMAD6O43541 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.22□□□□□ -1.89
SMAD6O43541 AC004024.1-201ENST00000549244 247 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.22□□□□□ -1.89
SMAD6O43541 AP000654.2-201ENST00000605633 586 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SMAD6O43541 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.22□□□□□ -1.89
SMAD6O43541 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.22□□□□□ -1.89
SMAD6O43541 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.22□□□□□ -1.89
SMAD6O43541 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.22□□□□□ -1.89
SMAD6O43541 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.89
SMAD6O43541 AC092435.3-201ENST00000565538 3654 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 MTND5P19-201ENST00000424872 1794 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 RNU6-637P-201ENST00000384050 107 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 SNORA7.4-201ENST00000384249 137 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 EIF4E2P1-201ENST00000393781 255 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 AL109755.1-201ENST00000401791 649 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.21□□□□□ -1.9
SMAD6O43541 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 RPL35AP22-201ENST00000436855 335 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.21□□□□□ -1.9
SMAD6O43541 ELOCP24-201ENST00000456370 334 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 SCARNA18-201ENST00000459004 134 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 SNORD97-201ENST00000459187 142 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 RN7SL442P-201ENST00000473804 320 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.21□□□□□ -1.9
SMAD6O43541 RBBP4P6-201ENST00000508098 202 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.21□□□□□ -1.9
SMAD6O43541 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.21□□□□□ -1.9
SMAD6O43541 RNU6-1213P-201ENST00000517075 94 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.21□□□□□ -1.9
SMAD6O43541 RNU6-988P-201ENST00000519081 107 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.21□□□□□ -1.9
SMAD6O43541 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.21□□□□□ -1.9
SMAD6O43541 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.21□□□□□ -1.9
SMAD6O43541 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.21□□□□□ -1.9
SMAD6O43541 AC138761.3-201ENST00000579993 334 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 MIR5690-201ENST00000583739 73 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 AC023043.2-201ENST00000589678 1026 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 AC007938.3-201ENST00000604965 623 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SMAD6O43541 AC091903.1-201ENST00000624322 454 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SMAD6O43541 MTND5P10-201ENST00000603719 1809 ntBASIC3.21□□□□□ -1.9
SMAD6O43541 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SMAD6O43541 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SMAD6O43541 AC010733.2-201ENST00000589496 5702 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 Y_RNA.112-201ENST00000363250 102 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 Y_RNA.148-201ENST00000363557 117 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 Y_RNA.212-201ENST00000364177 102 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 RNU6-1127P-201ENST00000384580 107 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 RNA5SP219-201ENST00000390940 113 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 RNU6-754P-201ENST00000391166 107 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 AL139397.2-201ENST00000404529 772 ntBASIC3.2□□□□□ -1.9
SMAD6O43541 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms