Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MIR6718-201ENST00000616153 80 ntBASIC0.75□□□□□ -2.29
CHD1O14646 OR5T3-201ENST00000303059 1023 ntBASIC0.74□□□□□ -2.29
CHD1O14646 RNU5E-1-201ENST00000362477 120 ntBASIC0.74□□□□□ -2.29
CHD1O14646 RNU1-23P-201ENST00000363361 144 ntBASIC0.74□□□□□ -2.29
CHD1O14646 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CHD1O14646 MIR329-2-201ENST00000385029 84 ntBASIC0.74□□□□□ -2.29
CHD1O14646 AL035410.1-201ENST00000427409 427 ntBASIC0.74□□□□□ -2.29
CHD1O14646 KATNBL1P6-201ENST00000453433 915 ntBASIC0.74□□□□□ -2.29
CHD1O14646 AP1S2P1-201ENST00000457344 379 ntBASIC0.74□□□□□ -2.29
CHD1O14646 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.74□□□□□ -2.29
CHD1O14646 CR383656.7-201ENST00000548164 174 ntBASIC0.74□□□□□ -2.29
CHD1O14646 NACAP3-201ENST00000552100 481 ntBASIC0.74□□□□□ -2.29
CHD1O14646 AC093510.2-201ENST00000562820 896 ntBASIC0.74□□□□□ -2.29
CHD1O14646 AC009310.1-201ENST00000414414 451 ntBASIC0.73□□□□□ -2.29
CHD1O14646 AL606490.4-201ENST00000423117 127 ntBASIC0.73□□□□□ -2.29
CHD1O14646 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.73□□□□□ -2.29
CHD1O14646 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.73□□□□□ -2.29
CHD1O14646 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.73□□□□□ -2.29
CHD1O14646 AC114982.2-201ENST00000461396 358 ntBASIC0.73□□□□□ -2.29
CHD1O14646 AC005668.1-201ENST00000571142 476 ntBASIC0.73□□□□□ -2.29
CHD1O14646 AC021851.1-201ENST00000608537 1082 ntBASIC0.73□□□□□ -2.29
CHD1O14646 AL078604.3-201ENST00000615580 211 ntBASIC0.73□□□□□ -2.29
CHD1O14646 AL121890.5-201ENST00000620848 304 ntBASIC0.73□□□□□ -2.29
CHD1O14646 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.73□□□□□ -2.29
CHD1O14646 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
CHD1O14646 RNU6-1151P-201ENST00000384684 107 ntBASIC0.72□□□□□ -2.29
CHD1O14646 MIR888-201ENST00000401186 77 ntBASIC0.72□□□□□ -2.29
CHD1O14646 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
CHD1O14646 UBE2V1P4-201ENST00000425374 344 ntBASIC0.72□□□□□ -2.29
CHD1O14646 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.72□□□□□ -2.29
CHD1O14646 SNORD124-201ENST00000459577 104 ntBASIC0.72□□□□□ -2.29
CHD1O14646 AC025459.1-201ENST00000504072 156 ntBASIC0.72□□□□□ -2.29
CHD1O14646 SNORA31.6-201ENST00000516241 130 ntBASIC0.72□□□□□ -2.29
CHD1O14646 SNORD19.2-201ENST00000516978 73 ntBASIC0.72□□□□□ -2.29
CHD1O14646 RNU6-902P-201ENST00000517212 91 ntBASIC0.72□□□□□ -2.29
CHD1O14646 AC012676.2-201ENST00000619258 186 ntBASIC0.72□□□□□ -2.29
CHD1O14646 AL355615.1-201ENST00000406187 641 ntBASIC0.72□□□□□ -2.29
CHD1O14646 LINC01347-201ENST00000417964 355 ntBASIC0.72□□□□□ -2.29
CHD1O14646 EIF4EP2-201ENST00000422816 654 ntBASIC0.72□□□□□ -2.29
CHD1O14646 AL392003.1-201ENST00000434394 243 ntBASIC0.72□□□□□ -2.29
CHD1O14646 MTCO1P53-201ENST00000441633 699 ntBASIC0.72□□□□□ -2.29
CHD1O14646 GTF2IP12-201ENST00000456547 356 ntBASIC0.72□□□□□ -2.29
CHD1O14646 RPL22P13-201ENST00000493291 347 ntBASIC0.72□□□□□ -2.29
CHD1O14646 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.72□□□□□ -2.29
CHD1O14646 HSPA8P13-201ENST00000523715 472 ntBASIC0.72□□□□□ -2.29
CHD1O14646 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.72□□□□□ -2.29
CHD1O14646 ADAM3B-201ENST00000569937 840 ntBASIC0.72□□□□□ -2.29
CHD1O14646 AC008121.1-201ENST00000603244 268 ntBASIC0.72□□□□□ -2.29
CHD1O14646 AC087045.1-201ENST00000605856 382 ntBASIC0.72□□□□□ -2.29
CHD1O14646 AC040168.1-201ENST00000623594 991 ntBASIC0.72□□□□□ -2.29
CHD1O14646 MIR424-201ENST00000362227 98 ntBASIC0.71□□□□□ -2.3
CHD1O14646 SNORD1A-201ENST00000364968 72 ntBASIC0.71□□□□□ -2.3
CHD1O14646 MRPL35P1-201ENST00000404272 572 ntBASIC0.71□□□□□ -2.3
CHD1O14646 NDUFB4P7-201ENST00000423198 363 ntBASIC0.71□□□□□ -2.3
CHD1O14646 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.71□□□□□ -2.3
CHD1O14646 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.71□□□□□ -2.3
CHD1O14646 AC124947.2-202ENST00000552735 133 ntBASIC0.71□□□□□ -2.3
CHD1O14646 AP005212.4-201ENST00000614206 710 ntBASIC0.71□□□□□ -2.3
CHD1O14646 AC024581.2-201ENST00000619986 252 ntBASIC0.71□□□□□ -2.3
CHD1O14646 AL512506.2-201ENST00000624472 458 ntBASIC0.71□□□□□ -2.3
CHD1O14646 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.7□□□□□ -2.3
CHD1O14646 RNA5SP331-201ENST00000364986 107 ntBASIC0.7□□□□□ -2.3
CHD1O14646 RNU1-36P-201ENST00000365130 165 ntBASIC0.7□□□□□ -2.3
CHD1O14646 MIR95-201ENST00000385072 81 ntBASIC0.7□□□□□ -2.3
CHD1O14646 MTND2P9-201ENST00000422293 931 ntBASIC0.7□□□□□ -2.3
CHD1O14646 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.7□□□□□ -2.3
CHD1O14646 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CHD1O14646 RPL9P9-202ENST00000466501 579 ntBASIC0.7□□□□□ -2.3
CHD1O14646 AC006512.1-201ENST00000468816 291 ntBASIC0.7□□□□□ -2.3
CHD1O14646 AC134050.1-201ENST00000495088 933 ntBASIC0.7□□□□□ -2.3
CHD1O14646 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.7□□□□□ -2.3
CHD1O14646 AC093677.1-201ENST00000514414 678 ntBASIC0.7□□□□□ -2.3
CHD1O14646 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.7□□□□□ -2.3
CHD1O14646 RAB11AP2-201ENST00000545905 639 ntBASIC0.7□□□□□ -2.3
CHD1O14646 SNRPGP17-201ENST00000603780 214 ntBASIC0.7□□□□□ -2.3
CHD1O14646 AP000654.2-201ENST00000605633 586 ntBASIC0.7□□□□□ -2.3
CHD1O14646 AC022202.1-201ENST00000613515 211 ntBASIC0.7□□□□□ -2.3
CHD1O14646 AL391597.1-201ENST00000618707 694 ntBASIC0.7□□□□□ -2.3
CHD1O14646 AC006213.5-201ENST00000619673 288 ntBASIC0.7□□□□□ -2.3
CHD1O14646 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
CHD1O14646 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.69□□□□□ -2.3
CHD1O14646 BPY2DP-201ENST00000422208 265 ntBASIC0.69□□□□□ -2.3
CHD1O14646 AC013410.2-201ENST00000422627 201 ntBASIC0.69□□□□□ -2.3
CHD1O14646 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.69□□□□□ -2.3
CHD1O14646 SNRPEP7-201ENST00000438350 220 ntBASIC0.69□□□□□ -2.3
CHD1O14646 BOLA3P3-201ENST00000505182 232 ntBASIC0.69□□□□□ -2.3
CHD1O14646 RNU6-322P-201ENST00000516010 103 ntBASIC0.69□□□□□ -2.3
CHD1O14646 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.69□□□□□ -2.3
CHD1O14646 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.69□□□□□ -2.3
CHD1O14646 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.69□□□□□ -2.3
CHD1O14646 AL391813.1-201ENST00000603098 260 ntBASIC0.69□□□□□ -2.3
CHD1O14646 AL031176.1-201ENST00000604554 466 ntBASIC0.69□□□□□ -2.3
CHD1O14646 AC009233.1-201ENST00000616477 371 ntBASIC0.69□□□□□ -2.3
CHD1O14646 ZNF680P1-201ENST00000436625 1469 ntBASIC0.69□□□□□ -2.3
CHD1O14646 MIR649-201ENST00000384843 97 ntBASIC0.69□□□□□ -2.3
CHD1O14646 HMGB1P17-201ENST00000403495 628 ntBASIC0.69□□□□□ -2.3
CHD1O14646 PIGPP2-201ENST00000411569 458 ntBASIC0.69□□□□□ -2.3
CHD1O14646 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.69□□□□□ -2.3
CHD1O14646 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.69□□□□□ -2.3
CHD1O14646 AL512844.2-201ENST00000433990 593 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms