Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 HMGN1P30-201ENST00000589286 268 ntBASIC2.46□□□□□ -2.02
DDX39AO00148 AL355297.2-201ENST00000604792 129 ntBASIC2.46□□□□□ -2.02
DDX39AO00148 AC093424.1-201ENST00000604999 338 ntBASIC2.46□□□□□ -2.02
DDX39AO00148 AC126118.1-201ENST00000607744 628 ntBASIC2.46□□□□□ -2.02
DDX39AO00148 AC096772.1-201ENST00000609146 564 ntBASIC2.46□□□□□ -2.02
DDX39AO00148 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.46□□□□□ -2.02
DDX39AO00148 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.46□□□□□ -2.02
DDX39AO00148 AL137847.3-201ENST00000611521 109 ntBASIC2.46□□□□□ -2.02
DDX39AO00148 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.46□□□□□ -2.02
DDX39AO00148 AP003400.5-201ENST00000624827 617 ntBASIC2.46□□□□□ -2.02
DDX39AO00148 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.46□□□□□ -2.02
DDX39AO00148 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.46□□□□□ -2.02
DDX39AO00148 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
DDX39AO00148 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
DDX39AO00148 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.45□□□□□ -2.02
DDX39AO00148 AC103710.2-202ENST00000641454 2853 ntBASIC2.45□□□□□ -2.02
DDX39AO00148 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
DDX39AO00148 RNU5E-1-201ENST00000362477 120 ntBASIC2.45□□□□□ -2.02
DDX39AO00148 RNU1-72P-201ENST00000362976 153 ntBASIC2.45□□□□□ -2.02
DDX39AO00148 RNU1-148P-201ENST00000384472 162 ntBASIC2.45□□□□□ -2.02
DDX39AO00148 RNU2-8P-201ENST00000410727 190 ntBASIC2.45□□□□□ -2.02
DDX39AO00148 Y_RNA.623-201ENST00000411128 95 ntBASIC2.45□□□□□ -2.02
DDX39AO00148 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.45□□□□□ -2.02
DDX39AO00148 Z99497.1-201ENST00000421282 135 ntBASIC2.45□□□□□ -2.02
DDX39AO00148 AL365338.1-201ENST00000422282 858 ntBASIC2.45□□□□□ -2.02
DDX39AO00148 MED13P1-201ENST00000428342 171 ntBASIC2.45□□□□□ -2.02
DDX39AO00148 AC016691.1-201ENST00000441321 413 ntBASIC2.45□□□□□ -2.02
DDX39AO00148 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.45□□□□□ -2.02
DDX39AO00148 AC012308.1-201ENST00000451232 178 ntBASIC2.45□□□□□ -2.02
DDX39AO00148 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.45□□□□□ -2.02
DDX39AO00148 Y_RNA.672-201ENST00000516289 104 ntBASIC2.45□□□□□ -2.02
DDX39AO00148 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.45□□□□□ -2.02
DDX39AO00148 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.45□□□□□ -2.02
DDX39AO00148 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
DDX39AO00148 AL022161.1-201ENST00000604390 213 ntBASIC2.45□□□□□ -2.02
DDX39AO00148 AL139286.2-201ENST00000606838 396 ntBASIC2.45□□□□□ -2.02
DDX39AO00148 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
DDX39AO00148 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.45□□□□□ -2.02
DDX39AO00148 AC010378.1-201ENST00000619270 362 ntBASIC2.45□□□□□ -2.02
DDX39AO00148 MIR203B-201ENST00000636080 86 ntBASIC2.45□□□□□ -2.02
DDX39AO00148 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
DDX39AO00148 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
DDX39AO00148 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.45□□□□□ -2.02
DDX39AO00148 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
DDX39AO00148 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
DDX39AO00148 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
DDX39AO00148 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
DDX39AO00148 RNU6-641P-201ENST00000384006 107 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 U3.37-201ENST00000408528 213 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 RNA5SP270-201ENST00000411361 118 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 AL160275.3-201ENST00000423876 471 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.44□□□□□ -2.02
DDX39AO00148 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
DDX39AO00148 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.44□□□□□ -2.02
DDX39AO00148 MED28P2-201ENST00000475771 317 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 AC022493.1-201ENST00000492984 337 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.44□□□□□ -2.02
DDX39AO00148 AC117522.1-201ENST00000509821 380 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 AC117522.2-201ENST00000510049 657 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.44□□□□□ -2.02
DDX39AO00148 RNU6-123P-201ENST00000516163 102 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 RNA5SP82-201ENST00000516707 92 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 AP000889.2-201ENST00000532684 490 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
DDX39AO00148 ZNF321P-202ENST00000550843 495 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.44□□□□□ -2.02
DDX39AO00148 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
DDX39AO00148 MIR548AC-201ENST00000585049 88 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 MIR6895-201ENST00000613497 78 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 AL161423.1-201ENST00000613700 262 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 AC009831.4-201ENST00000620744 325 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 MIR6132-201ENST00000622083 109 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 AC012640.5-201ENST00000623897 319 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 AC099654.13-201ENST00000639774 207 ntBASIC2.44□□□□□ -2.02
DDX39AO00148 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
DDX39AO00148 RNY1P12-201ENST00000364251 105 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 MIR558-201ENST00000384920 94 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 CISD1P1-201ENST00000393907 327 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 RPL23AP32-201ENST00000395315 459 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 RNU2-39P-201ENST00000410604 198 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 AC127391.1-201ENST00000411737 98 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.43□□□□□ -2.02
DDX39AO00148 MTND4P20-201ENST00000424125 869 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 AL627311.1-201ENST00000431514 115 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.43□□□□□ -2.02
DDX39AO00148 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.43□□□□□ -2.02
DDX39AO00148 MTND1P30-201ENST00000441241 901 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.43□□□□□ -2.02
DDX39AO00148 AC010095.1-201ENST00000443543 144 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 RPL7P43-201ENST00000478876 753 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 YWHAEP4-201ENST00000505390 198 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 AC092436.1-201ENST00000506450 503 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 AC112206.3-201ENST00000514578 389 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 AP004607.1-201ENST00000524456 203 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 RPL21P5-201ENST00000554662 472 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 PSMA3P-201ENST00000555485 635 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 AC025678.1-201ENST00000567861 338 ntBASIC2.43□□□□□ -2.02
DDX39AO00148 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms