Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.58□□□□□ -2
TRIM49BA6NDI0 RNU5F-8P-201ENST00000515941 111 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 RNU6-314P-201ENST00000516574 104 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49BA6NDI0 AC109329.2-201ENST00000519658 482 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 AC021269.2-201ENST00000532318 330 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49BA6NDI0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49BA6NDI0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.58□□□□□ -2
TRIM49BA6NDI0 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49BA6NDI0 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.58□□□□□ -2
TRIM49BA6NDI0 AL356280.1-201ENST00000603614 379 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 AC109347.2-201ENST00000610220 349 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 AL449363.1-201ENST00000617815 186 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 SNHG22-203ENST00000617833 660 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 AC093648.1-201ENST00000623546 606 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49BA6NDI0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM49BA6NDI0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
TRIM49BA6NDI0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.57□□□□□ -2
TRIM49BA6NDI0 AC010329.5-201ENST00000623497 2174 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 AL359693.1-201ENST00000614959 2407 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TRIM49BA6NDI0 Y_RNA.1-201ENST00000352915 104 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 RNU4-82P-201ENST00000362443 140 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 RNU1-138P-201ENST00000384093 164 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 RNU6-74P-201ENST00000384235 107 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 SNORD115-47-201ENST00000391226 86 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRIM49BA6NDI0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.57□□□□□ -2
TRIM49BA6NDI0 BPY2DP-201ENST00000422208 265 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.57□□□□□ -2
TRIM49BA6NDI0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.57□□□□□ -2
TRIM49BA6NDI0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.57□□□□□ -2
TRIM49BA6NDI0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.57□□□□□ -2
TRIM49BA6NDI0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.57□□□□□ -2
TRIM49BA6NDI0 EIF4EP3-201ENST00000498782 656 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 AC234781.5-201ENST00000508429 271 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.57□□□□□ -2
TRIM49BA6NDI0 MTND1P5-201ENST00000517906 940 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 MTCYBP20-201ENST00000524239 1129 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.57□□□□□ -2
TRIM49BA6NDI0 OR5B19P-201ENST00000531766 928 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.57□□□□□ -2
TRIM49BA6NDI0 AC245014.2-201ENST00000603689 287 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 AC246785.4-201ENST00000605374 287 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRIM49BA6NDI0 AL589994.2-201ENST00000621124 579 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 AC124864.2-201ENST00000624736 186 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 SEPT14P19-203ENST00000633205 211 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 IGHVIII-44-202ENST00000636235 289 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 MIR3199-2-201ENST00000636243 86 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 ZNF271P-202ENST00000465539 1970 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.57□□□□□ -2
TRIM49BA6NDI0 ELF2P3-201ENST00000445099 1506 ntBASIC2.57□□□□□ -2
TRIM49BA6NDI0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.56□□□□□ -2
TRIM49BA6NDI0 RNU6-1167P-201ENST00000363227 94 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 Y_RNA.256-201ENST00000364594 104 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
TRIM49BA6NDI0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.56□□□□□ -2
TRIM49BA6NDI0 RNU6-14P-201ENST00000384630 106 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 RNU6-278P-201ENST00000390945 109 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 NDUFS5P1-201ENST00000405668 289 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 U3.37-201ENST00000408528 213 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 HMGN2P35-201ENST00000412164 270 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.56□□□□□ -2
TRIM49BA6NDI0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.56□□□□□ -2
TRIM49BA6NDI0 PIGFP2-201ENST00000421400 651 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 CALM2P2-201ENST00000428512 440 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC002486.1-201ENST00000435098 391 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC018634.1-201ENST00000437554 401 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC098831.1-201ENST00000440661 216 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.56□□□□□ -2
TRIM49BA6NDI0 MTND1P1-201ENST00000445453 368 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AL513328.1-201ENST00000446460 224 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC108059.3-201ENST00000456388 214 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AL162395.1-201ENST00000457882 422 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC093899.1-201ENST00000457984 376 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC107626.1-201ENST00000471084 183 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC128713.1-201ENST00000471495 306 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC007182.2-201ENST00000489251 402 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC019235.1-201ENST00000503847 207 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC114781.4-201ENST00000513707 639 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 SCARNA17.1-201ENST00000516211 143 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 SCARNA17.2-201ENST00000516334 143 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 MTND4LP26-201ENST00000518144 282 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.56□□□□□ -2
TRIM49BA6NDI0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC007151.1-201ENST00000572774 483 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC024619.4-201ENST00000580924 316 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC007363.1-201ENST00000604736 620 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC107294.1-201ENST00000609524 467 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 SCARNA17.4-201ENST00000614296 143 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 AC072046.2-201ENST00000618366 268 ntBASIC2.56□□□□□ -2
TRIM49BA6NDI0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.56□□□□□ -2
TRIM49BA6NDI0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRIM49BA6NDI0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms