Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 HIGD1AP13-201ENST00000509878 289 ntBASIC2.33□□□□□ -2.04
ELL3Q9HB65 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.33□□□□□ -2.04
ELL3Q9HB65 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.33□□□□□ -2.04
ELL3Q9HB65 SNORA31.15-201ENST00000516771 132 ntBASIC2.33□□□□□ -2.04
ELL3Q9HB65 OR4R1P-201ENST00000529879 463 ntBASIC2.33□□□□□ -2.04
ELL3Q9HB65 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.33□□□□□ -2.04
ELL3Q9HB65 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.33□□□□□ -2.04
ELL3Q9HB65 AL121821.2-201ENST00000556081 394 ntBASIC2.33□□□□□ -2.04
ELL3Q9HB65 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.33□□□□□ -2.04
ELL3Q9HB65 AC091152.3-201ENST00000604227 325 ntBASIC2.33□□□□□ -2.04
ELL3Q9HB65 AL035413.2-201ENST00000604801 525 ntBASIC2.33□□□□□ -2.04
ELL3Q9HB65 AC064807.4-201ENST00000607201 407 ntBASIC2.33□□□□□ -2.04
ELL3Q9HB65 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.33□□□□□ -2.04
ELL3Q9HB65 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ELL3Q9HB65 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 Y_RNA.1-201ENST00000352915 104 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 RNU6-1120P-201ENST00000362988 108 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 RNU6-1180P-201ENST00000364935 107 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 RNU5A-6P-201ENST00000384136 116 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
ELL3Q9HB65 RNU6-780P-201ENST00000391030 104 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 RNA5SP210-201ENST00000391034 120 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 CALM2P3-201ENST00000400429 449 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 MTCYBP8-201ENST00000422855 651 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 AL669831.1-202ENST00000428504 417 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 AC073464.1-201ENST00000429823 534 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 HMGB1P9-201ENST00000429856 646 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 AC002486.1-201ENST00000435098 391 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.32□□□□□ -2.04
ELL3Q9HB65 AC004383.1-201ENST00000438135 289 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 GTF2IP13-201ENST00000438487 386 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 AC104058.1-201ENST00000448028 297 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.32□□□□□ -2.04
ELL3Q9HB65 AC092001.1-201ENST00000453012 261 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 CACYBPP2-201ENST00000453625 678 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 snoU109.2-201ENST00000459316 135 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 AL121769.1-201ENST00000469473 401 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 EIF4EP3-201ENST00000498782 656 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.32□□□□□ -2.04
ELL3Q9HB65 HMGB1P29-201ENST00000505659 499 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 RN7SKP219-201ENST00000516825 296 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.32□□□□□ -2.04
ELL3Q9HB65 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ELL3Q9HB65 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ELL3Q9HB65 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.32□□□□□ -2.04
ELL3Q9HB65 AC079600.2-201ENST00000550076 130 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.32□□□□□ -2.04
ELL3Q9HB65 AC106782.4-201ENST00000568264 210 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 MIR4703-201ENST00000577728 79 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 MIR4635-201ENST00000583759 79 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 AC078795.2-201ENST00000602835 1252 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 AL355877.2-201ENST00000603670 358 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 AL355598.1-201ENST00000604169 202 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 AL033523.1-201ENST00000605153 153 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 AP001596.2-201ENST00000608410 312 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 AC135507.2-201ENST00000612443 309 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 AC011939.3-201ENST00000613686 466 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 MIR6134-201ENST00000617606 109 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 CR381653.2-201ENST00000624041 768 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.32□□□□□ -2.04
ELL3Q9HB65 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.32□□□□□ -2.04
ELL3Q9HB65 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
ELL3Q9HB65 AL355596.1-201ENST00000565399 3996 ntBASIC2.32□□□□□ -2.04
ELL3Q9HB65 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
ELL3Q9HB65 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
ELL3Q9HB65 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
ELL3Q9HB65 RNU6-1287P-201ENST00000362914 107 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 RNU6-395P-201ENST00000365662 106 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 RNU6-1060P-201ENST00000384664 107 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 MIR592-201ENST00000384959 97 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 MIR627-201ENST00000384979 97 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 RNU4-55P-201ENST00000410731 137 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 RNU6-193P-201ENST00000410977 107 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.31□□□□□ -2.04
ELL3Q9HB65 CYCSP33-201ENST00000414485 327 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.31□□□□□ -2.04
ELL3Q9HB65 COTL1P1-201ENST00000422309 375 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.31□□□□□ -2.04
ELL3Q9HB65 C8orf59P1-201ENST00000429930 303 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 AC087499.2-201ENST00000432861 149 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 AL596276.1-201ENST00000434465 418 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 AL078601.1-201ENST00000444542 271 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.31□□□□□ -2.04
ELL3Q9HB65 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.31□□□□□ -2.04
ELL3Q9HB65 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.31□□□□□ -2.04
ELL3Q9HB65 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.31□□□□□ -2.04
ELL3Q9HB65 RPL9P6-201ENST00000492764 598 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.31□□□□□ -2.04
ELL3Q9HB65 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.31□□□□□ -2.04
ELL3Q9HB65 AC113155.1-201ENST00000511141 769 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.31□□□□□ -2.04
ELL3Q9HB65 SUB1P1-201ENST00000524415 382 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.31□□□□□ -2.04
ELL3Q9HB65 RANP3-201ENST00000530970 276 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
ELL3Q9HB65 NACAP3-201ENST00000552100 481 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 EIF4BP1-201ENST00000554881 351 ntBASIC2.31□□□□□ -2.04
ELL3Q9HB65 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.31□□□□□ -2.04
ELL3Q9HB65 LINC00933-203ENST00000559812 219 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms