Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 RNU2-23P-201ENST00000410545 195 ntBASIC3.63□□□□□ -1.83
NDC1Q9BTX1 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.63□□□□□ -1.83
NDC1Q9BTX1 RPS23P3-201ENST00000470993 430 ntBASIC3.63□□□□□ -1.83
NDC1Q9BTX1 AC011005.2-201ENST00000487324 359 ntBASIC3.63□□□□□ -1.83
NDC1Q9BTX1 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.63□□□□□ -1.83
NDC1Q9BTX1 RNU6-635P-201ENST00000516651 102 ntBASIC3.63□□□□□ -1.83
NDC1Q9BTX1 RNU4-77P-201ENST00000516692 156 ntBASIC3.63□□□□□ -1.83
NDC1Q9BTX1 OR5D17P-201ENST00000531492 978 ntBASIC3.63□□□□□ -1.83
NDC1Q9BTX1 AP002404.1-201ENST00000532005 451 ntBASIC3.63□□□□□ -1.83
NDC1Q9BTX1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.63□□□□□ -1.83
NDC1Q9BTX1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.63□□□□□ -1.83
NDC1Q9BTX1 AC018889.1-201ENST00000605372 397 ntBASIC3.63□□□□□ -1.83
NDC1Q9BTX1 AC123912.5-201ENST00000605470 343 ntBASIC3.63□□□□□ -1.83
NDC1Q9BTX1 AL713922.2-201ENST00000619384 716 ntBASIC3.63□□□□□ -1.83
NDC1Q9BTX1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NDC1Q9BTX1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NDC1Q9BTX1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.63□□□□□ -1.83
NDC1Q9BTX1 AL359693.1-201ENST00000614959 2407 ntBASIC3.63□□□□□ -1.83
NDC1Q9BTX1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
NDC1Q9BTX1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.63□□□□□ -1.83
NDC1Q9BTX1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NDC1Q9BTX1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.62□□□□□ -1.83
NDC1Q9BTX1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.62□□□□□ -1.83
NDC1Q9BTX1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
NDC1Q9BTX1 RNA5SP387-201ENST00000364226 106 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 RNU6-702P-201ENST00000364982 107 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NDC1Q9BTX1 RNU6-790P-201ENST00000384479 105 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 Y_RNA.574-201ENST00000384766 95 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 MIR493-201ENST00000385254 89 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 RNU6-1197P-201ENST00000391183 107 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 SNORA11.1-201ENST00000408133 129 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 RNU6-325P-201ENST00000411132 105 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 RAB9AP3-201ENST00000412737 573 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 DPH3P2-201ENST00000422618 250 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 BX276092.3-201ENST00000424182 230 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 FTH1P6-201ENST00000430768 320 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 AC099799.1-201ENST00000439809 192 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 Z82210.1-201ENST00000440037 231 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 RAB9AP1-201ENST00000449393 573 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 U8.20-201ENST00000459445 131 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 RPL21P13-201ENST00000488305 481 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 AC113155.1-201ENST00000511141 769 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 MIR2114-201ENST00000516645 80 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.62□□□□□ -1.83
NDC1Q9BTX1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.62□□□□□ -1.83
NDC1Q9BTX1 AL161670.1-201ENST00000554348 137 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 SUB1P3-201ENST00000564581 315 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 MIR3690-201ENST00000580266 75 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 MIR3668-201ENST00000582138 75 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.62□□□□□ -1.83
NDC1Q9BTX1 SNORD58B-201ENST00000607313 66 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 AL591516.1-201ENST00000611326 274 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NDC1Q9BTX1 AC106871.1-201ENST00000568324 3102 ntBASIC3.62□□□□□ -1.83
NDC1Q9BTX1 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.62□□□□□ -1.83
NDC1Q9BTX1 UBE3AP2-201ENST00000429033 2259 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 Y_RNA.48-201ENST00000362710 103 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 RNU6-238P-201ENST00000363313 106 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 RNU6-450P-201ENST00000364654 107 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 RNU6-596P-201ENST00000365395 98 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 MIR7-3-201ENST00000384898 110 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 RNU6-907P-201ENST00000390924 102 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 RNA5SP239-201ENST00000410218 129 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 RNU6-174P-201ENST00000410406 106 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 RNU2-68P-201ENST00000410878 191 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 CRYBB2P1-203ENST00000415709 538 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 MYL8P-204ENST00000431574 518 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 NDUFB1P2-201ENST00000449477 176 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 AL353752.1-201ENST00000454946 260 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 AL133162.1-201ENST00000463228 453 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 RPL21P104-201ENST00000464143 478 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 AC110794.1-201ENST00000505816 425 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 AC105758.1-201ENST00000506038 399 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 RNU2-58P-201ENST00000516403 183 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 SCARNA14-201ENST00000516903 136 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 RNA5SP165-201ENST00000517142 115 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 Y_RNA.721-201ENST00000517207 102 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 AC025755.1-201ENST00000521306 278 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 MIR5187-201ENST00000583479 76 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.61□□□□□ -1.83
NDC1Q9BTX1 AL355598.1-201ENST00000604169 202 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 AC124312.5-201ENST00000604451 268 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 PRR13P7-201ENST00000605538 430 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 SNORA51-201ENST00000606420 132 ntBASIC3.61□□□□□ -1.83
NDC1Q9BTX1 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms