Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TIMP4Q99727 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TIMP4Q99727 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TIMP4Q99727 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TIMP4Q99727 SNORA71.3-201ENST00000362582 128 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 Y_RNA.314-201ENST00000365114 102 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 RNU6-1222P-201ENST00000384615 107 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 Y_RNA.574-201ENST00000384766 95 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 RNU6-101P-201ENST00000410323 104 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 RNU2-23P-201ENST00000410545 195 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 AL513331.1-201ENST00000411908 397 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 BX276092.3-201ENST00000424182 230 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 AC093151.1-201ENST00000427711 313 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 AC091286.1-201ENST00000431233 461 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 NDUFB1P1-201ENST00000435191 180 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 HMGB1P12-201ENST00000438594 598 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.38□□□□□ -1.87
TIMP4Q99727 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.38□□□□□ -1.87
TIMP4Q99727 RPL7P5-201ENST00000471472 736 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 AC092451.1-201ENST00000480211 153 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 AC108860.1-201ENST00000484521 383 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 AC105758.1-201ENST00000506038 399 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.38□□□□□ -1.87
TIMP4Q99727 RNU6-927P-201ENST00000516199 100 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 AC026403.1-201ENST00000518938 295 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 GNAI2P1-201ENST00000541815 315 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.38□□□□□ -1.87
TIMP4Q99727 HSBP1P1-201ENST00000555205 166 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.38□□□□□ -1.87
TIMP4Q99727 U7.8-201ENST00000619968 63 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.38□□□□□ -1.87
TIMP4Q99727 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.38□□□□□ -1.87
TIMP4Q99727 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.38□□□□□ -1.87
TIMP4Q99727 AC066616.2-201ENST00000559334 1481 ntBASIC3.38□□□□□ -1.87
TIMP4Q99727 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.38□□□□□ -1.87
TIMP4Q99727 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
TIMP4Q99727 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.38□□□□□ -1.87
TIMP4Q99727 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.38□□□□□ -1.87
TIMP4Q99727 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
TIMP4Q99727 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TIMP4Q99727 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
TIMP4Q99727 Y_RNA.188-201ENST00000363952 111 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 RNU6-99P-201ENST00000364721 107 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 Y_RNA.324-201ENST00000365165 102 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 RNU1-115P-201ENST00000365329 160 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 Y_RNA.424-201ENST00000384063 103 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 Y_RNA.512-201ENST00000384518 102 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 SNORA41-201ENST00000384675 132 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 RNU6-607P-201ENST00000411283 108 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 CYCSP33-201ENST00000414485 327 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.37□□□□□ -1.87
TIMP4Q99727 AC006946.1-201ENST00000429106 328 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TIMP4Q99727 AL353997.1-201ENST00000432936 108 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 AL031274.1-201ENST00000450334 232 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 ANP32BP2-201ENST00000454525 545 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 AL353752.1-201ENST00000454946 260 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 AC034236.1-201ENST00000469891 373 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 AC116655.1-201ENST00000508324 901 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 NDUFB4P9-201ENST00000511646 388 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 SNORA70.14-201ENST00000516205 110 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 RNU4-77P-201ENST00000516692 156 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 RNU6-1271P-201ENST00000517049 105 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.37□□□□□ -1.87
TIMP4Q99727 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.37□□□□□ -1.87
TIMP4Q99727 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.37□□□□□ -1.87
TIMP4Q99727 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TIMP4Q99727 AC244505.7-201ENST00000599675 272 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 AL160281.1-201ENST00000605307 311 ntBASIC3.37□□□□□ -1.87
TIMP4Q99727 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TIMP4Q99727 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TIMP4Q99727 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TIMP4Q99727 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TIMP4Q99727 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TIMP4Q99727 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
TIMP4Q99727 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TIMP4Q99727 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TIMP4Q99727 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TIMP4Q99727 AL133383.2-201ENST00000622958 2336 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
TIMP4Q99727 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
TIMP4Q99727 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TIMP4Q99727 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
TIMP4Q99727 RNU6-173P-201ENST00000364215 104 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 RNA5SP51-201ENST00000364750 119 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 RNU2-3P-201ENST00000410144 191 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 RNU2-37P-201ENST00000410695 177 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 Y_RNA.618-201ENST00000410949 107 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 NUP35P1-201ENST00000422734 947 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 AC022493.1-201ENST00000492984 337 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 AC005921.1-201ENST00000510589 286 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 AC008716.1-201ENST00000511084 513 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 AC023141.12-201ENST00000512399 199 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 RNU1-86P-201ENST00000516108 154 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 RNU1-107P-201ENST00000516617 154 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 SNORA31.20-201ENST00000517111 133 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 AP004371.1-201ENST00000525240 214 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.36□□□□□ -1.87
TIMP4Q99727 AP004242.1-201ENST00000533701 349 ntBASIC3.36□□□□□ -1.87
TIMP4Q99727 LRRC37A5P-203ENST00000580181 585 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms