Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 AC006518.2-201ENST00000542513 940 ntBASIC1.09□□□□□ -2.23
LYSMD1Q96S90 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.09□□□□□ -2.23
LYSMD1Q96S90 MIR4422-201ENST00000581938 83 ntBASIC1.09□□□□□ -2.23
LYSMD1Q96S90 AF038458.1-201ENST00000588406 262 ntBASIC1.09□□□□□ -2.23
LYSMD1Q96S90 AC097655.1-201ENST00000635075 318 ntBASIC1.09□□□□□ -2.23
LYSMD1Q96S90 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.09□□□□□ -2.23
LYSMD1Q96S90 ZNF680P1-201ENST00000436625 1469 ntBASIC1.09□□□□□ -2.24
LYSMD1Q96S90 RBBP8P1-201ENST00000449447 1844 ntBASIC1.08□□□□□ -2.24
LYSMD1Q96S90 ZNF29P-201ENST00000225587 168 ntBASIC1.08□□□□□ -2.24
LYSMD1Q96S90 RNU1-22P-201ENST00000363334 158 ntBASIC1.08□□□□□ -2.24
LYSMD1Q96S90 MIR518D-201ENST00000385014 87 ntBASIC1.08□□□□□ -2.24
LYSMD1Q96S90 AL365400.1-201ENST00000431854 640 ntBASIC1.08□□□□□ -2.24
LYSMD1Q96S90 GPM6BP2-201ENST00000432046 144 ntBASIC1.08□□□□□ -2.24
LYSMD1Q96S90 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.08□□□□□ -2.24
LYSMD1Q96S90 GPM6BP1-201ENST00000446387 144 ntBASIC1.08□□□□□ -2.24
LYSMD1Q96S90 RPL30P12-201ENST00000474666 353 ntBASIC1.08□□□□□ -2.24
LYSMD1Q96S90 ACA59.2-201ENST00000517061 156 ntBASIC1.08□□□□□ -2.24
LYSMD1Q96S90 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.08□□□□□ -2.24
LYSMD1Q96S90 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.08□□□□□ -2.24
LYSMD1Q96S90 AC005832.3-201ENST00000537929 631 ntBASIC1.08□□□□□ -2.24
LYSMD1Q96S90 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.08□□□□□ -2.24
LYSMD1Q96S90 MIR4789-201ENST00000577469 82 ntBASIC1.08□□□□□ -2.24
LYSMD1Q96S90 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.08□□□□□ -2.24
LYSMD1Q96S90 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.08□□□□□ -2.24
LYSMD1Q96S90 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.08□□□□□ -2.24
LYSMD1Q96S90 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.08□□□□□ -2.24
LYSMD1Q96S90 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
LYSMD1Q96S90 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
LYSMD1Q96S90 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
LYSMD1Q96S90 RNU6-223P-201ENST00000362830 107 ntBASIC1.07□□□□□ -2.24
LYSMD1Q96S90 RNU2-41P-201ENST00000410991 178 ntBASIC1.07□□□□□ -2.24
LYSMD1Q96S90 MTND1P21-201ENST00000412991 285 ntBASIC1.07□□□□□ -2.24
LYSMD1Q96S90 OR6C66P-201ENST00000414917 930 ntBASIC1.07□□□□□ -2.24
LYSMD1Q96S90 BX119904.4-201ENST00000424402 301 ntBASIC1.07□□□□□ -2.24
LYSMD1Q96S90 RPS29P28-201ENST00000446439 141 ntBASIC1.07□□□□□ -2.24
LYSMD1Q96S90 PTENP1-201ENST00000447117 1215 ntBASIC1.07□□□□□ -2.24
LYSMD1Q96S90 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.07□□□□□ -2.24
LYSMD1Q96S90 AL590365.1-201ENST00000450788 243 ntBASIC1.07□□□□□ -2.24
LYSMD1Q96S90 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.07□□□□□ -2.24
LYSMD1Q96S90 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.07□□□□□ -2.24
LYSMD1Q96S90 RPS3AP22-201ENST00000488297 769 ntBASIC1.07□□□□□ -2.24
LYSMD1Q96S90 AC110760.3-202ENST00000515177 371 ntBASIC1.07□□□□□ -2.24
LYSMD1Q96S90 RNU6-678P-201ENST00000516832 109 ntBASIC1.07□□□□□ -2.24
LYSMD1Q96S90 AP005660.1-201ENST00000522972 293 ntBASIC1.07□□□□□ -2.24
LYSMD1Q96S90 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.07□□□□□ -2.24
LYSMD1Q96S90 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.07□□□□□ -2.24
LYSMD1Q96S90 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.07□□□□□ -2.24
LYSMD1Q96S90 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.07□□□□□ -2.24
LYSMD1Q96S90 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
LYSMD1Q96S90 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.07□□□□□ -2.24
LYSMD1Q96S90 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.07□□□□□ -2.24
LYSMD1Q96S90 CYP2C61P-201ENST00000604072 290 ntBASIC1.07□□□□□ -2.24
LYSMD1Q96S90 AC010900.2-201ENST00000604508 210 ntBASIC1.07□□□□□ -2.24
LYSMD1Q96S90 AL161798.1-201ENST00000604630 131 ntBASIC1.07□□□□□ -2.24
LYSMD1Q96S90 MIR337-201ENST00000362281 93 ntBASIC1.06□□□□□ -2.24
LYSMD1Q96S90 SNORD14B-201ENST00000364533 90 ntBASIC1.06□□□□□ -2.24
LYSMD1Q96S90 RNU6-1032P-201ENST00000384100 107 ntBASIC1.06□□□□□ -2.24
LYSMD1Q96S90 MIR597-201ENST00000384968 97 ntBASIC1.06□□□□□ -2.24
LYSMD1Q96S90 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
LYSMD1Q96S90 RNU2-36P-201ENST00000410361 191 ntBASIC1.06□□□□□ -2.24
LYSMD1Q96S90 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.06□□□□□ -2.24
LYSMD1Q96S90 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.06□□□□□ -2.24
LYSMD1Q96S90 OR6C5P-201ENST00000452388 923 ntBASIC1.06□□□□□ -2.24
LYSMD1Q96S90 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.06□□□□□ -2.24
LYSMD1Q96S90 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.06□□□□□ -2.24
LYSMD1Q96S90 TOMM22P6-201ENST00000465035 409 ntBASIC1.06□□□□□ -2.24
LYSMD1Q96S90 AC087343.1-201ENST00000477341 475 ntBASIC1.06□□□□□ -2.24
LYSMD1Q96S90 AC099513.1-201ENST00000490423 301 ntBASIC1.06□□□□□ -2.24
LYSMD1Q96S90 RNU6-586P-201ENST00000517265 104 ntBASIC1.06□□□□□ -2.24
LYSMD1Q96S90 AP004247.1-201ENST00000531556 1289 ntBASIC1.06□□□□□ -2.24
LYSMD1Q96S90 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.06□□□□□ -2.24
LYSMD1Q96S90 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.06□□□□□ -2.24
LYSMD1Q96S90 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.06□□□□□ -2.24
LYSMD1Q96S90 AC080078.3-201ENST00000605407 463 ntBASIC1.06□□□□□ -2.24
LYSMD1Q96S90 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LYSMD1Q96S90 AC092140.2-201ENST00000618027 521 ntBASIC1.06□□□□□ -2.24
LYSMD1Q96S90 AC253576.2-201ENST00000618815 580 ntBASIC1.06□□□□□ -2.24
LYSMD1Q96S90 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.06□□□□□ -2.24
LYSMD1Q96S90 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.06□□□□□ -2.24
LYSMD1Q96S90 RNU6-97P-201ENST00000363387 104 ntBASIC1.05□□□□□ -2.24
LYSMD1Q96S90 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
LYSMD1Q96S90 MIR1262-201ENST00000408276 93 ntBASIC1.05□□□□□ -2.24
LYSMD1Q96S90 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.05□□□□□ -2.24
LYSMD1Q96S90 TRIM60P13-201ENST00000432350 1283 ntBASIC1.05□□□□□ -2.24
LYSMD1Q96S90 AC020550.1-201ENST00000447385 163 ntBASIC1.05□□□□□ -2.24
LYSMD1Q96S90 ARPC3P5-201ENST00000448802 534 ntBASIC1.05□□□□□ -2.24
LYSMD1Q96S90 MRPL42P4-201ENST00000453267 443 ntBASIC1.05□□□□□ -2.24
LYSMD1Q96S90 FABP5P15-201ENST00000453566 214 ntBASIC1.05□□□□□ -2.24
LYSMD1Q96S90 RPL37P6-201ENST00000460682 294 ntBASIC1.05□□□□□ -2.24
LYSMD1Q96S90 AC005908.1-201ENST00000468701 347 ntBASIC1.05□□□□□ -2.24
LYSMD1Q96S90 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.05□□□□□ -2.24
LYSMD1Q96S90 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.05□□□□□ -2.24
LYSMD1Q96S90 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.05□□□□□ -2.24
LYSMD1Q96S90 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.05□□□□□ -2.24
LYSMD1Q96S90 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.05□□□□□ -2.24
LYSMD1Q96S90 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
LYSMD1Q96S90 AC100814.1-201ENST00000606963 623 ntBASIC1.05□□□□□ -2.24
LYSMD1Q96S90 RNU6-91P-201ENST00000607774 107 ntBASIC1.05□□□□□ -2.24
LYSMD1Q96S90 AC034229.4-201ENST00000607861 441 ntBASIC1.05□□□□□ -2.24
LYSMD1Q96S90 AC243773.3-201ENST00000613270 256 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms