Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SNORA48.8-201ENST00000391324 134 ntBASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 AL353621.1-201ENST00000418219 243 ntBASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 AL645937.1-202ENST00000421799 937 ntBASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 AL513185.2-201ENST00000425543 193 ntBASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 HMGB1P9-201ENST00000429856 646 ntBASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 MTND4P18-201ENST00000447010 465 ntBASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 TBCAP3-201ENST00000512475 312 ntBASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 Y_RNA.665-201ENST00000516177 98 ntBASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 MIR892C-201ENST00000516410 77 ntBASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 RNU6-703P-201ENST00000516946 107 ntBASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 AC018638.8-201ENST00000588755 281 ntBASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 AC107294.3-201ENST00000609211 526 ntBASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 AC090617.10-201ENST00000624308 134 ntBASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 Y_RNA.88-201ENST00000363029 99 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 RNU6-525P-201ENST00000363685 104 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 RNU6-522P-201ENST00000364497 107 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 RNU6-1303P-201ENST00000364841 107 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 RPL5P18-201ENST00000406671 891 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 RNA5SP293-201ENST00000410527 113 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 RNU6-607P-201ENST00000411283 108 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 RPLP0P7-201ENST00000416050 667 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 SKA2P1-201ENST00000425592 390 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 AL627311.1-201ENST00000431514 115 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 AL353705.1-201ENST00000433468 480 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 AC009969.1-201ENST00000438726 172 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 AL031183.1-201ENST00000457667 207 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 AC091179.1-201ENST00000461606 579 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 RPS27P29-201ENST00000463110 252 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 AC134698.4-201ENST00000523451 826 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 AC023050.3-201ENST00000541142 333 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 NACAP3-201ENST00000552100 481 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 AC090115.3-201ENST00000553218 849 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 LRRC37A5P-203ENST00000580181 585 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 AC011712.1-201ENST00000588959 234 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 AL645944.1-201ENST00000603857 493 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 AL161629.2-201ENST00000615347 275 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 AC103705.1-201ENST00000619013 241 ntBASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CHMP4CQ96CF2 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 Y_RNA.72-201ENST00000362894 103 ntBASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 SNORD14B-201ENST00000364533 90 ntBASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 RNU6-166P-201ENST00000384371 107 ntBASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 MIR34A-201ENST00000385130 110 ntBASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 RPL7P10-201ENST00000417407 739 ntBASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 RPL21P111-201ENST00000418453 477 ntBASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 MTATP6P23-201ENST00000440153 476 ntBASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 NDUFB1P2-201ENST00000449477 176 ntBASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 AC006483.1-201ENST00000487308 313 ntBASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 AC083904.1-201ENST00000487828 231 ntBASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 RPS29P20-201ENST00000489592 171 ntBASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 SNORA19.2-201ENST00000516013 114 ntBASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 RNU6-1183P-201ENST00000517054 60 ntBASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 AC069113.1-201ENST00000517763 267 ntBASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 AC004852.3-201ENST00000614131 326 ntBASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CHMP4CQ96CF2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.8
CHMP4CQ96CF2 AC121333.1-201ENST00000567488 2709 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 SNORD56.3-201ENST00000363507 71 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 DYNLT3P1-201ENST00000378574 347 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 SNORA32.2-201ENST00000384049 122 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 Y_RNA.530-201ENST00000384587 101 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 MIR10A-201ENST00000385043 110 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 EIF4E2P1-201ENST00000393781 255 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 AC138393.2-201ENST00000414742 246 ntBASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.83□□□□□ -1.8
CHMP4CQ96CF2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms