Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.65□□□□□ -1.99
VPS33AQ96AX1 AC104136.1-201ENST00000512969 394 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 MIR892C-201ENST00000516410 77 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.65□□□□□ -1.99
VPS33AQ96AX1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS33AQ96AX1 SUB1P2-201ENST00000556401 297 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 AC119751.7-201ENST00000600494 245 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 HMGB1P24-202ENST00000615653 685 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.65□□□□□ -1.99
VPS33AQ96AX1 CR381653.2-201ENST00000624041 768 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 AC090582.1-201ENST00000636321 199 ntBASIC2.65□□□□□ -1.99
VPS33AQ96AX1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS33AQ96AX1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.65□□□□□ -1.99
VPS33AQ96AX1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS33AQ96AX1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS33AQ96AX1 SNORA25.6-201ENST00000364121 118 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS33AQ96AX1 RNU6-1029P-201ENST00000384109 107 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 MIR7-3-201ENST00000384898 110 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 RAP1BP3-201ENST00000407180 549 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 TOMM20P4-201ENST00000427861 435 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AL358934.1-201ENST00000432346 324 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AL162395.1-201ENST00000457882 422 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 RN7SL807P-201ENST00000470923 297 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AC117503.1-201ENST00000472241 394 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AL358832.1-201ENST00000497800 389 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 RN7SKP298-201ENST00000515950 94 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS33AQ96AX1 CR383656.8-201ENST00000549046 145 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 MIR4429-201ENST00000580105 73 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 RSL24D1P11-201ENST00000591045 491 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 RPS15AP11-201ENST00000594193 385 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AC024153.1-201ENST00000603103 365 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AC008945.2-201ENST00000606056 604 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AC098614.4-201ENST00000607601 462 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AC091834.1-201ENST00000614543 472 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AC009509.4-201ENST00000619202 509 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AC010297.1-201ENST00000623948 149 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 FO624990.1-201ENST00000636373 85 ntBASIC2.64□□□□□ -1.99
VPS33AQ96AX1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VPS33AQ96AX1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VPS33AQ96AX1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
VPS33AQ96AX1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AC006020.1-201ENST00000420179 1854 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.63□□□□□ -1.99
VPS33AQ96AX1 RNU6-858P-201ENST00000362436 107 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 RNU6-1120P-201ENST00000362988 108 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VPS33AQ96AX1 RNU6-843P-201ENST00000384454 104 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 RNU6-851P-201ENST00000384565 107 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 MIR670-201ENST00000390142 98 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 CDK8P2-201ENST00000415020 547 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AC003685.2-201ENST00000422795 395 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AC000111.3-201ENST00000433478 193 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AL360221.1-201ENST00000445989 335 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.63□□□□□ -1.99
VPS33AQ96AX1 VN1R34P-201ENST00000447387 883 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 BX510359.1-201ENST00000456973 237 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 RPS29P26-201ENST00000477483 171 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AC008526.1-201ENST00000509149 338 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AC010493.1-201ENST00000513479 292 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AC114781.4-201ENST00000513707 639 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 RNU1-86P-201ENST00000516108 154 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 SNORA74D-201ENST00000516404 141 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 RNU1-107P-201ENST00000516617 154 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.63□□□□□ -1.99
VPS33AQ96AX1 MIR4703-201ENST00000577728 79 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 LRRC37A5P-203ENST00000580181 585 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AC073539.2-201ENST00000597113 165 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AC073648.5-201ENST00000603502 305 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AL049779.4-201ENST00000604500 156 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 ATP5A1P2-202ENST00000616464 443 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AC136475.10-201ENST00000620253 385 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AC096644.4-201ENST00000563417 2912 ntBASIC2.63□□□□□ -1.99
VPS33AQ96AX1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VPS33AQ96AX1 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.63□□□□□ -1.99
VPS33AQ96AX1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.62□□□□□ -1.99
VPS33AQ96AX1 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 OR56A5-201ENST00000340110 738 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 SNORD116-1-201ENST00000384335 95 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 RNU6-607P-201ENST00000411283 108 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 MTATP6P18-201ENST00000417994 673 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 AC236972.1-201ENST00000433225 199 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.62□□□□□ -1.99
VPS33AQ96AX1 CALM1P1-201ENST00000442082 433 ntBASIC2.62□□□□□ -1.99
VPS33AQ96AX1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms