Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
BRF1Q92994 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.3□□□□□ -1.72
BRF1Q92994 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
BRF1Q92994 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.3□□□□□ -1.72
BRF1Q92994 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
BRF1Q92994 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.29□□□□□ -1.72
BRF1Q92994 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BRF1Q92994 RNU6-1318P-201ENST00000365389 103 ntBASIC4.29□□□□□ -1.72
BRF1Q92994 Y_RNA.485-201ENST00000384395 102 ntBASIC4.29□□□□□ -1.72
BRF1Q92994 SNORA57.1-201ENST00000391227 145 ntBASIC4.29□□□□□ -1.72
BRF1Q92994 AL592148.1-201ENST00000413568 445 ntBASIC4.29□□□□□ -1.72
BRF1Q92994 AL353752.1-201ENST00000454946 260 ntBASIC4.29□□□□□ -1.72
BRF1Q92994 AC010655.3-201ENST00000478818 450 ntBASIC4.29□□□□□ -1.72
BRF1Q92994 AP000889.1-201ENST00000530968 660 ntBASIC4.29□□□□□ -1.72
BRF1Q92994 AC004024.1-201ENST00000549244 247 ntBASIC4.29□□□□□ -1.72
BRF1Q92994 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.29□□□□□ -1.72
BRF1Q92994 MIR4273-201ENST00000582824 84 ntBASIC4.29□□□□□ -1.72
BRF1Q92994 AL355598.1-201ENST00000604169 202 ntBASIC4.29□□□□□ -1.72
BRF1Q92994 Z98751.3-201ENST00000604447 521 ntBASIC4.29□□□□□ -1.72
BRF1Q92994 AL121917.1-203ENST00000605534 577 ntBASIC4.29□□□□□ -1.72
BRF1Q92994 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BRF1Q92994 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.29□□□□□ -1.72
BRF1Q92994 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BRF1Q92994 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BRF1Q92994 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BRF1Q92994 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.28□□□□□ -1.72
BRF1Q92994 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.28□□□□□ -1.72
BRF1Q92994 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
BRF1Q92994 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.28□□□□□ -1.72
BRF1Q92994 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
BRF1Q92994 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
BRF1Q92994 Y_RNA.126-201ENST00000363382 111 ntBASIC4.28□□□□□ -1.72
BRF1Q92994 Y_RNA.188-201ENST00000363952 111 ntBASIC4.28□□□□□ -1.72
BRF1Q92994 Y_RNA.245-201ENST00000364493 95 ntBASIC4.28□□□□□ -1.72
BRF1Q92994 RNU6-1279P-201ENST00000383917 103 ntBASIC4.28□□□□□ -1.72
BRF1Q92994 Y_RNA.424-201ENST00000384063 103 ntBASIC4.28□□□□□ -1.72
BRF1Q92994 MTHFD2P2-201ENST00000407725 247 ntBASIC4.28□□□□□ -1.72
BRF1Q92994 SNORA57.3-201ENST00000411095 141 ntBASIC4.28□□□□□ -1.72
BRF1Q92994 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
BRF1Q92994 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.28□□□□□ -1.72
BRF1Q92994 CYP4F29P-201ENST00000420685 446 ntBASIC4.28□□□□□ -1.72
BRF1Q92994 AC002075.2-201ENST00000425207 252 ntBASIC4.28□□□□□ -1.72
BRF1Q92994 AL031274.1-201ENST00000450334 232 ntBASIC4.28□□□□□ -1.72
BRF1Q92994 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.28□□□□□ -1.72
BRF1Q92994 RNU6-1256P-201ENST00000516539 103 ntBASIC4.28□□□□□ -1.72
BRF1Q92994 SNORA40.14-201ENST00000516543 86 ntBASIC4.28□□□□□ -1.72
BRF1Q92994 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.28□□□□□ -1.72
BRF1Q92994 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.28□□□□□ -1.72
BRF1Q92994 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.28□□□□□ -1.72
BRF1Q92994 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.28□□□□□ -1.72
BRF1Q92994 AC090132.2-201ENST00000615881 347 ntBASIC4.28□□□□□ -1.72
BRF1Q92994 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.28□□□□□ -1.72
BRF1Q92994 MIR4272-201ENST00000635924 64 ntBASIC4.28□□□□□ -1.72
BRF1Q92994 AC008669.1-201ENST00000565823 2178 ntBASIC4.28□□□□□ -1.72
BRF1Q92994 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.28□□□□□ -1.72
BRF1Q92994 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BRF1Q92994 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
BRF1Q92994 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BRF1Q92994 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
BRF1Q92994 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.27□□□□□ -1.73
BRF1Q92994 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
BRF1Q92994 Y_RNA.152-201ENST00000363578 100 ntBASIC4.27□□□□□ -1.73
BRF1Q92994 RNA5SP42-201ENST00000364278 115 ntBASIC4.27□□□□□ -1.73
BRF1Q92994 Y_RNA.314-201ENST00000365114 102 ntBASIC4.27□□□□□ -1.73
BRF1Q92994 U8.8-201ENST00000365399 135 ntBASIC4.27□□□□□ -1.73
BRF1Q92994 RNU6-933P-201ENST00000384424 107 ntBASIC4.27□□□□□ -1.73
BRF1Q92994 AL591034.2-201ENST00000402839 359 ntBASIC4.27□□□□□ -1.73
BRF1Q92994 AL513475.1-201ENST00000406602 315 ntBASIC4.27□□□□□ -1.73
BRF1Q92994 RNU2-33P-201ENST00000410344 192 ntBASIC4.27□□□□□ -1.73
BRF1Q92994 RNU6-1156P-201ENST00000410365 100 ntBASIC4.27□□□□□ -1.73
BRF1Q92994 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.27□□□□□ -1.73
BRF1Q92994 AL590383.1-201ENST00000428602 75 ntBASIC4.27□□□□□ -1.73
BRF1Q92994 AC078817.1-201ENST00000492623 435 ntBASIC4.27□□□□□ -1.73
BRF1Q92994 UBE2CP3-201ENST00000502715 450 ntBASIC4.27□□□□□ -1.73
BRF1Q92994 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.27□□□□□ -1.73
BRF1Q92994 CBX3P8-201ENST00000532412 525 ntBASIC4.27□□□□□ -1.73
BRF1Q92994 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.27□□□□□ -1.73
BRF1Q92994 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.27□□□□□ -1.73
BRF1Q92994 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
BRF1Q92994 MYL12BP1-201ENST00000569826 507 ntBASIC4.27□□□□□ -1.73
BRF1Q92994 AC090425.1-201ENST00000610007 140 ntBASIC4.27□□□□□ -1.73
BRF1Q92994 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.27□□□□□ -1.73
BRF1Q92994 AL359693.1-201ENST00000614959 2407 ntBASIC4.27□□□□□ -1.73
BRF1Q92994 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
BRF1Q92994 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BRF1Q92994 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
BRF1Q92994 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.27□□□□□ -1.73
BRF1Q92994 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
BRF1Q92994 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
BRF1Q92994 RNY1P16-201ENST00000363063 111 ntBASIC4.26□□□□□ -1.73
BRF1Q92994 SNORD14B-201ENST00000364533 90 ntBASIC4.26□□□□□ -1.73
BRF1Q92994 RNU6-450P-201ENST00000364654 107 ntBASIC4.26□□□□□ -1.73
BRF1Q92994 RNU6-99P-201ENST00000364721 107 ntBASIC4.26□□□□□ -1.73
BRF1Q92994 RNU6-741P-201ENST00000383889 107 ntBASIC4.26□□□□□ -1.73
BRF1Q92994 MIR1252-201ENST00000408861 65 ntBASIC4.26□□□□□ -1.73
BRF1Q92994 SNORD56-201ENST00000413522 71 ntBASIC4.26□□□□□ -1.73
BRF1Q92994 AL627311.1-201ENST00000431514 115 ntBASIC4.26□□□□□ -1.73
BRF1Q92994 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.26□□□□□ -1.73
BRF1Q92994 RPS29P31-201ENST00000446147 164 ntBASIC4.26□□□□□ -1.73
BRF1Q92994 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms