Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 SNORD26-201ENST00000384147 75 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 RNU6-1316P-201ENST00000384242 108 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 RNU1-57P-201ENST00000384491 166 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 RPL21P24-201ENST00000413752 448 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 SNRPEP7-201ENST00000438350 220 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 RPS15AP9-201ENST00000439856 381 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 AC017099.1-201ENST00000448261 1028 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 AC108210.2-201ENST00000503681 201 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 MTCO3P27-201ENST00000514397 196 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 RNU6-150P-201ENST00000516237 95 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 AC021451.1-201ENST00000523498 1129 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 CYCSP27-201ENST00000527643 293 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 AC135279.1-201ENST00000543493 504 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 AL132657.2-201ENST00000564417 358 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 AC126365.2-201ENST00000580630 379 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 MIR4303-201ENST00000581299 66 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 AC103987.3-201ENST00000582071 292 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 MTATP6P2-201ENST00000603319 678 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 AC099842.1-201ENST00000619919 596 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 DDX43P2-201ENST00000604753 1354 ntBASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
ZNF439Q8NDP4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 RNU6-1032P-201ENST00000384100 107 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AL133475.1-201ENST00000404414 305 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AL590084.1-201ENST00000407885 387 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AC127391.1-201ENST00000411737 98 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 MTND4P3-201ENST00000417829 541 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 SNRPGP13-201ENST00000442212 177 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 HSPE1P24-201ENST00000450782 238 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 OR5B19P-201ENST00000531766 928 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AL670379.6-201ENST00000603753 252 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AL670379.11-201ENST00000604059 253 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AL670379.10-201ENST00000604330 253 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AC008162.1-201ENST00000604718 254 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AL670379.1-201ENST00000604752 252 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AL670379.2-201ENST00000604983 252 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AL670379.5-201ENST00000605253 252 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AL670379.4-201ENST00000605279 254 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AL670379.12-201ENST00000605291 253 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AL670379.8-201ENST00000605353 252 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AL670379.9-201ENST00000605428 253 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AL670379.7-201ENST00000605823 252 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AC090186.1-201ENST00000605991 572 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 RNU6-91P-201ENST00000607774 107 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 RMST_6.1-201ENST00000611980 203 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 MIR6134-201ENST00000617606 109 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AC008121.3-201ENST00000618726 433 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AC013470.4-201ENST00000619978 986 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 U1.36-201ENST00000620684 176 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 AC097655.1-201ENST00000635075 318 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.14□□□□□ -2.23
ZNF439Q8NDP4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 MIR518D-201ENST00000385014 87 ntBASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 MIR150-201ENST00000385048 84 ntBASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 MIR29C-201ENST00000385231 88 ntBASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 Y_RNA.578-201ENST00000390903 88 ntBASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 RNU11-3P-201ENST00000391111 133 ntBASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 RNA5SP501-201ENST00000410990 112 ntBASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 AL953862.1-201ENST00000423016 168 ntBASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 HMGB1P27-201ENST00000431429 603 ntBASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 MTCO2P25-201ENST00000447065 681 ntBASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 ELOCP30-201ENST00000447108 299 ntBASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 AL590365.1-201ENST00000450788 243 ntBASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 AC005908.1-201ENST00000468701 347 ntBASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 RPL7P43-201ENST00000478876 753 ntBASIC1.13□□□□□ -2.23
ZNF439Q8NDP4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms