Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC71LQ8N9Z2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 MIR208A-201ENST00000362287 71 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 RNA5SP374-201ENST00000362939 125 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-1097P-201ENST00000363586 107 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 SNORA62.1-201ENST00000364287 154 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 Y_RNA.333-201ENST00000365274 102 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 Y_RNA.367-201ENST00000365544 101 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-108P-201ENST00000365558 107 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 Y_RNA.534-201ENST00000384599 112 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 MIR218-1-201ENST00000384999 110 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 CISD1P1-201ENST00000393907 327 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 RNU2-9P-201ENST00000410194 145 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 RNA5SP111-201ENST00000411386 101 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 AL109913.1-201ENST00000421173 514 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 MTCO2P11-201ENST00000431069 680 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 GZMAP1-201ENST00000503054 631 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 RNA5SP282-201ENST00000516355 108 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 AP003122.3-201ENST00000526316 255 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 AC084851.1-201ENST00000529105 249 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 AC087241.2-201ENST00000535801 324 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 AC007151.1-201ENST00000572774 483 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 MIR5195-201ENST00000583555 115 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 AL645944.1-201ENST00000603857 493 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 AC007938.3-201ENST00000604965 623 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 AC104073.3-201ENST00000610942 955 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 Z99129.1-201ENST00000612510 255 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 AC012409.4-201ENST00000612923 249 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 AL359547.2-201ENST00000615810 418 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 AL157786.1-207ENST00000627771 695 ntBASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.1□□□□□ -2.07
CCDC71LQ8N9Z2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 RNA5SP387-201ENST00000364226 106 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-61P-201ENST00000365528 109 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-898P-201ENST00000365627 104 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 Z98749.2-208ENST00000381646 500 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 RNU5A-6P-201ENST00000384136 116 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-74P-201ENST00000384235 107 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 RNVU1-14-201ENST00000384770 164 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 MIR9-1-201ENST00000385198 89 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 MIR301A-201ENST00000385261 86 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 Y_RNA.582-201ENST00000391023 95 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 GSTA9P-201ENST00000406231 611 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-1025P-201ENST00000410629 104 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 USP9YP6-201ENST00000413550 854 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 RPL35AP12-201ENST00000425362 338 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AL139132.1-201ENST00000431587 344 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 MTCO3P5-201ENST00000433620 714 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AL451074.3-201ENST00000437709 472 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 RPS15AP9-201ENST00000439856 381 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AL513328.1-201ENST00000446460 224 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AC132479.1-201ENST00000449160 144 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 MTATP6P7-201ENST00000453315 681 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AC006512.1-201ENST00000468816 291 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 RPS29P26-201ENST00000477483 171 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AC109927.2-201ENST00000506416 303 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AC010493.1-201ENST00000513479 292 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 RNU5F-8P-201ENST00000515941 111 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 SNORA31.19-201ENST00000517079 126 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 SNORA70.24-201ENST00000517233 118 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AP000889.2-201ENST00000532684 490 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AC009063.1-201ENST00000563342 702 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AC025678.1-201ENST00000567861 338 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 DEFB131E-202ENST00000602581 683 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AL670379.4-201ENST00000605279 254 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AC126118.1-201ENST00000607744 628 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 AC012640.5-201ENST00000623897 319 ntBASIC2.09□□□□□ -2.07
CCDC71LQ8N9Z2 U6.114-201ENST00000636407 96 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms