Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC011939.3-201ENST00000613686 466 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 MIR6134-201ENST00000617606 109 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 AL589994.2-201ENST00000621124 579 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 AC017037.3-201ENST00000625016 472 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 CDC27P3-201ENST00000635418 1910 ntBASIC2.17□□□□□ -2.06
CCDC65Q8IXS2 ADAM3A-203ENST00000461344 2157 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 RNU6-533P-201ENST00000384144 107 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 MIR518D-201ENST00000385014 87 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 Y_RNA.608-201ENST00000410647 95 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 EIF4EP4-201ENST00000424916 578 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 MTND4P25-201ENST00000441039 533 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 KLF3P2-201ENST00000465138 268 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 RPL38P4-201ENST00000502376 214 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 MRPS17P9-201ENST00000511924 393 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 RNU6-581P-201ENST00000516214 105 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 MTND4LP18-201ENST00000526864 291 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 AC010186.2-204ENST00000537668 439 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 MIR4760-201ENST00000585040 80 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 AC007229.1-201ENST00000590455 412 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 AC022022.2-201ENST00000602989 360 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 AL109918.3-201ENST00000603072 338 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 AL355816.2-201ENST00000610049 647 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 AC130324.3-201ENST00000614165 542 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 MIR7844-201ENST00000616161 122 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 YWHAEP7-203ENST00000622054 312 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 AC244517.12-201ENST00000623581 663 ntBASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CCDC65Q8IXS2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CCDC65Q8IXS2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.15□□□□□ -2.06
CCDC65Q8IXS2 RNU6-946P-201ENST00000383878 107 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 SNORA75B-201ENST00000384053 137 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 GSTA9P-201ENST00000406231 611 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 HIGD1AP15-201ENST00000416198 280 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 RPL30P4-201ENST00000429309 333 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 AL591704.1-201ENST00000432574 275 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 MTCYBP39-201ENST00000437562 491 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 AL590365.1-201ENST00000450788 243 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 SSXP1-201ENST00000453640 473 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 DYNLL1P5-201ENST00000467158 270 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 MTAPP1-201ENST00000489154 819 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 AC112204.1-201ENST00000502591 103 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 RNU6-914P-201ENST00000516749 109 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 SCARNA3-201ENST00000517097 143 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 MIR3167-201ENST00000579623 85 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 MIR3199-1-201ENST00000582434 88 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 AC121334.2-201ENST00000605387 271 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 AC022893.3-201ENST00000607665 437 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 AC034229.4-201ENST00000607861 441 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 AC138749.5-201ENST00000611461 208 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 AC116165.2-201ENST00000616705 206 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 DUXAP9-208ENST00000622815 614 ntBASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
CCDC65Q8IXS2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 SNORA70B-201ENST00000384210 135 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 MIR218-1-201ENST00000384999 110 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 MTCYBP36-201ENST00000404146 440 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 EIF1AXP1-201ENST00000419267 435 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 RPL22P17-201ENST00000438729 315 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 AC092001.1-201ENST00000453012 261 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 RPL37P6-201ENST00000460682 294 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 AC109927.2-201ENST00000506416 303 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 AF131216.2-201ENST00000512316 564 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 RNA5SP337-201ENST00000517007 109 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 EEF1A1P37-201ENST00000522748 715 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 MIR5571-201ENST00000577998 113 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 SNRPGP19-201ENST00000603826 189 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 AL021997.1-201ENST00000605757 193 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 AL031775.1-201ENST00000607014 887 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 AC004223.4-201ENST00000612426 332 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 AC024581.2-201ENST00000619986 252 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 AC110994.2-201ENST00000635481 492 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 AC099654.13-201ENST00000639774 207 ntBASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC65Q8IXS2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms