Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.35□□□□□ -1.71
RUFY4Q6ZNE9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.35□□□□□ -1.71
RUFY4Q6ZNE9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.35□□□□□ -1.71
RUFY4Q6ZNE9 MIR4273-201ENST00000582824 84 ntBASIC4.35□□□□□ -1.71
RUFY4Q6ZNE9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.35□□□□□ -1.71
RUFY4Q6ZNE9 RNU6-6P-201ENST00000606623 107 ntBASIC4.35□□□□□ -1.71
RUFY4Q6ZNE9 AC069200.1-201ENST00000609511 323 ntBASIC4.35□□□□□ -1.71
RUFY4Q6ZNE9 AC019176.2-201ENST00000611579 315 ntBASIC4.35□□□□□ -1.71
RUFY4Q6ZNE9 AL138825.1-201ENST00000618587 192 ntBASIC4.35□□□□□ -1.71
RUFY4Q6ZNE9 AC027309.3-201ENST00000623419 351 ntBASIC4.35□□□□□ -1.71
RUFY4Q6ZNE9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.35□□□□□ -1.71
RUFY4Q6ZNE9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.35□□□□□ -1.71
RUFY4Q6ZNE9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RUFY4Q6ZNE9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 RNU6-50P-201ENST00000362356 103 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 Y_RNA.39-201ENST00000362620 98 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 U8.8-201ENST00000365399 135 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 Y_RNA.455-201ENST00000384230 98 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 RNU6-166P-201ENST00000384371 107 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 MIR10A-201ENST00000385043 110 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 RNU2-23P-201ENST00000410545 195 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 AC098614.2-201ENST00000426040 255 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 AC093151.1-201ENST00000427711 313 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 AL158071.1-201ENST00000430315 461 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 AC087650.1-201ENST00000431445 468 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 SNRPEP9-201ENST00000436794 238 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 NDUFS5P3-201ENST00000450668 321 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 PRSS3P4-201ENST00000453323 162 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 RPL21P104-201ENST00000464143 478 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 AC133134.1-201ENST00000466800 359 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 AC092447.9-201ENST00000603395 144 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 AC004805.2-201ENST00000605382 482 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 AC004852.3-201ENST00000614131 326 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 AC087588.2-201ENST00000617667 426 ntBASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.34□□□□□ -1.71
RUFY4Q6ZNE9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 RPL9P7-201ENST00000330965 580 ntBASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 RNU6-600P-201ENST00000362524 99 ntBASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 U1.1-201ENST00000384101 164 ntBASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 RNU6-1197P-201ENST00000391183 107 ntBASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 BX276092.3-201ENST00000424182 230 ntBASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 AL513043.1-201ENST00000439124 535 ntBASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 AC013470.1-201ENST00000453438 462 ntBASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 AC092798.1-201ENST00000458542 409 ntBASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 RPL9P32-201ENST00000464118 620 ntBASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 RPL9P9-202ENST00000466501 579 ntBASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 RPL23AP45-201ENST00000476406 468 ntBASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 AC022447.4-201ENST00000504053 364 ntBASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 AC004817.2-201ENST00000561794 651 ntBASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 AC008121.1-201ENST00000603244 268 ntBASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 AC119674.1-207ENST00000641355 633 ntBASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 AC090740.1-201ENST00000623193 2262 ntBASIC4.33□□□□□ -1.72
RUFY4Q6ZNE9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 Y_RNA.149-201ENST00000363558 117 ntBASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 RNA5SP97-201ENST00000365006 84 ntBASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 MIR1302-3-201ENST00000408128 138 ntBASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 AL117339.3-201ENST00000418733 162 ntBASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 EIF4EP2-201ENST00000422816 654 ntBASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 AC091286.1-201ENST00000431233 461 ntBASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 RNU1-95P-201ENST00000516357 160 ntBASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 RNU1-128P-201ENST00000516704 160 ntBASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 RNU6-572P-201ENST00000516724 80 ntBASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 AL355598.1-201ENST00000604169 202 ntBASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 PRR13P7-201ENST00000605538 430 ntBASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 AL606534.2-204ENST00000635008 178 ntBASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RUFY4Q6ZNE9 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 314.1 ms