Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 U2.21-201ENST00000637295 81 ntBASIC0.94□□□□□ -2.26
CCDC171Q6TFL3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.94□□□□□ -2.26
CCDC171Q6TFL3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CCDC171Q6TFL3 RNU5E-1-201ENST00000362477 120 ntBASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 MIR146A-201ENST00000385201 99 ntBASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 SKA2P1-201ENST00000425592 390 ntBASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 AC004941.2-201ENST00000427009 228 ntBASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 MTCO2P20-201ENST00000437339 673 ntBASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 AL161651.1-201ENST00000440882 223 ntBASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 RPL32P14-201ENST00000463196 378 ntBASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 RPS15AP17-201ENST00000470598 390 ntBASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 RNU7-40P-201ENST00000516397 64 ntBASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 OR5B19P-201ENST00000531766 928 ntBASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 AC008127.2-201ENST00000549925 1075 ntBASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 AF129408.1-201ENST00000608767 431 ntBASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 AC104820.1-201ENST00000624183 307 ntBASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 AL512506.2-201ENST00000624472 458 ntBASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 SGO1P1-201ENST00000603525 1447 ntBASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
CCDC171Q6TFL3 Y_RNA.40-201ENST00000362645 93 ntBASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 RNU6-778P-201ENST00000363269 103 ntBASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 RNU6-619P-201ENST00000365146 108 ntBASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 RNA5SP501-201ENST00000410990 112 ntBASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 TRIM60P13-201ENST00000432350 1283 ntBASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 snoU13.9-201ENST00000458927 103 ntBASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 MTCYBP16-201ENST00000509187 1129 ntBASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 SNORA25.11-201ENST00000515935 105 ntBASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 AC021739.1-201ENST00000559631 174 ntBASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 MIR5000-201ENST00000577717 103 ntBASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 MIR3167-201ENST00000579623 85 ntBASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.92□□□□□ -2.26
CCDC171Q6TFL3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 SNORD116-23-201ENST00000384645 92 ntBASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 AC078974.1-201ENST00000411597 223 ntBASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 MTCYBP32-201ENST00000427945 1084 ntBASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 AL050341.1-201ENST00000447743 313 ntBASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 AC090502.2-201ENST00000549267 280 ntBASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 PSMA3P-201ENST00000555485 635 ntBASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 AL731537.2-201ENST00000561565 951 ntBASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 AC090079.2-201ENST00000575289 768 ntBASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 AC239868.4-201ENST00000608318 671 ntBASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 ZNF849P-201ENST00000594711 1566 ntBASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 AC018630.2-201ENST00000534866 2403 ntBASIC0.91□□□□□ -2.26
CCDC171Q6TFL3 RNU6-17P-201ENST00000384245 107 ntBASIC0.9□□□□□ -2.26
CCDC171Q6TFL3 RNU6-18P-201ENST00000384527 107 ntBASIC0.9□□□□□ -2.26
CCDC171Q6TFL3 MIR16-1-201ENST00000385271 89 ntBASIC0.9□□□□□ -2.26
CCDC171Q6TFL3 AL591034.2-201ENST00000402839 359 ntBASIC0.9□□□□□ -2.26
CCDC171Q6TFL3 UBE2V1P11-201ENST00000411559 285 ntBASIC0.9□□□□□ -2.26
CCDC171Q6TFL3 RPL26P27-201ENST00000414397 437 ntBASIC0.9□□□□□ -2.26
CCDC171Q6TFL3 PRPS1P1-201ENST00000445305 876 ntBASIC0.9□□□□□ -2.26
CCDC171Q6TFL3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.9□□□□□ -2.26
CCDC171Q6TFL3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.9□□□□□ -2.26
CCDC171Q6TFL3 AC023824.3-201ENST00000569003 562 ntBASIC0.9□□□□□ -2.26
CCDC171Q6TFL3 ROCK1P1-201ENST00000573767 549 ntBASIC0.9□□□□□ -2.26
CCDC171Q6TFL3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.9□□□□□ -2.26
CCDC171Q6TFL3 AL713866.2-201ENST00000603579 219 ntBASIC0.9□□□□□ -2.26
CCDC171Q6TFL3 AC107075.1-201ENST00000613695 314 ntBASIC0.9□□□□□ -2.26
CCDC171Q6TFL3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.9□□□□□ -2.26
CCDC171Q6TFL3 AL159972.1-201ENST00000625150 448 ntBASIC0.9□□□□□ -2.26
CCDC171Q6TFL3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.9□□□□□ -2.26
CCDC171Q6TFL3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
CCDC171Q6TFL3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.9□□□□□ -2.27
CCDC171Q6TFL3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.9□□□□□ -2.27
CCDC171Q6TFL3 RNU6-582P-201ENST00000362989 107 ntBASIC0.89□□□□□ -2.27
CCDC171Q6TFL3 RNU11-3P-201ENST00000391111 133 ntBASIC0.89□□□□□ -2.27
CCDC171Q6TFL3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.89□□□□□ -2.27
CCDC171Q6TFL3 AL592310.1-201ENST00000414330 671 ntBASIC0.89□□□□□ -2.27
CCDC171Q6TFL3 PTGES3P4-201ENST00000426243 356 ntBASIC0.89□□□□□ -2.27
CCDC171Q6TFL3 TPTE2P1-204ENST00000435256 593 ntBASIC0.89□□□□□ -2.27
CCDC171Q6TFL3 SNRPEP9-201ENST00000436794 238 ntBASIC0.89□□□□□ -2.27
CCDC171Q6TFL3 AL135790.2-201ENST00000437701 267 ntBASIC0.89□□□□□ -2.27
CCDC171Q6TFL3 PTGES3P1-201ENST00000439531 483 ntBASIC0.89□□□□□ -2.27
CCDC171Q6TFL3 KATNBL1P3-201ENST00000443475 909 ntBASIC0.89□□□□□ -2.27
CCDC171Q6TFL3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC171Q6TFL3 RPL30P7-201ENST00000479312 323 ntBASIC0.89□□□□□ -2.27
CCDC171Q6TFL3 RPL36AP48-201ENST00000485521 314 ntBASIC0.89□□□□□ -2.27
CCDC171Q6TFL3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC171Q6TFL3 UBL5P1-201ENST00000507979 193 ntBASIC0.89□□□□□ -2.27
CCDC171Q6TFL3 AC048346.1-201ENST00000510247 144 ntBASIC0.89□□□□□ -2.27
CCDC171Q6TFL3 AC092436.3-201ENST00000511788 257 ntBASIC0.89□□□□□ -2.27
CCDC171Q6TFL3 NRON-201ENST00000517270 370 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms