Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AP004607.1-201ENST00000524456 203 ntBASIC3.5□□□□□ -1.85
PPP4R4Q6NUP7 AP005597.4-201ENST00000526762 229 ntBASIC3.5□□□□□ -1.85
PPP4R4Q6NUP7 SCOCP1-201ENST00000554676 349 ntBASIC3.5□□□□□ -1.85
PPP4R4Q6NUP7 MIR3942-201ENST00000585264 109 ntBASIC3.5□□□□□ -1.85
PPP4R4Q6NUP7 AL137843.1-201ENST00000605078 385 ntBASIC3.5□□□□□ -1.85
PPP4R4Q6NUP7 uc_338.14-201ENST00000613162 166 ntBASIC3.5□□□□□ -1.85
PPP4R4Q6NUP7 AC009248.2-201ENST00000619826 254 ntBASIC3.5□□□□□ -1.85
PPP4R4Q6NUP7 AL354798.1-201ENST00000622505 329 ntBASIC3.5□□□□□ -1.85
PPP4R4Q6NUP7 FP236240.3-201ENST00000623061 327 ntBASIC3.5□□□□□ -1.85
PPP4R4Q6NUP7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PPP4R4Q6NUP7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.5□□□□□ -1.85
PPP4R4Q6NUP7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PPP4R4Q6NUP7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-1252P-201ENST00000363054 104 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 RNA5SP42-201ENST00000364278 115 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 AP002088.1-201ENST00000382740 395 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-1083P-201ENST00000384022 107 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 FTH1P15-201ENST00000406984 280 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 RPL7P10-201ENST00000417407 739 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 MTND4LP11-201ENST00000422184 280 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 AC004383.1-201ENST00000438135 289 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 AL513043.1-201ENST00000439124 535 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 RPS27P29-201ENST00000463110 252 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 AC025465.4-201ENST00000513422 638 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 SNORA31.6-201ENST00000516241 130 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 AP000763.2-201ENST00000540641 163 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 AC019159.1-201ENST00000605094 187 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 AC245389.1-201ENST00000605141 529 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 AC019176.2-201ENST00000611579 315 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 AC011890.2-201ENST00000613393 294 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 AC090617.7-201ENST00000623952 126 ntBASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PPP4R4Q6NUP7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 MIR30E-201ENST00000362104 92 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-37P-201ENST00000362692 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-11P-201ENST00000364234 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-7-201ENST00000364784 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-8-201ENST00000365467 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-25P-201ENST00000383873 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-1-201ENST00000383898 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-48P-201ENST00000384161 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-36P-201ENST00000384172 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-4P-201ENST00000384205 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-5P-201ENST00000384238 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-3P-201ENST00000384314 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-16P-201ENST00000384385 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-15P-201ENST00000384534 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-2-201ENST00000384627 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-29P-201ENST00000384637 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-9-201ENST00000384776 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-33P-201ENST00000384793 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RN7SKP156-201ENST00000410308 342 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNA5SP293-201ENST00000410527 113 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 SNORD56-201ENST00000413522 71 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 AL513477.1-202ENST00000417061 214 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 PDCL2P1-201ENST00000419302 352 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 MTCO3P46-201ENST00000425787 232 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 BX679664.1-201ENST00000434429 253 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 Z96811.1-201ENST00000445880 108 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 MTND4P18-201ENST00000447010 465 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 PMCHL2-203ENST00000457791 237 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RPL23AP45-201ENST00000476406 468 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 MRPL42P6-201ENST00000486397 371 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 AC092185.1-201ENST00000491371 97 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 AC079140.5-201ENST00000507882 310 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 AC098799.2-201ENST00000509466 868 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU4-49P-201ENST00000516080 140 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 AL121579.1-201ENST00000555129 305 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 AC006557.5-201ENST00000603126 811 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 RNU6-6P-201ENST00000606623 107 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 AL357078.3-201ENST00000607528 618 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 MIR7515-201ENST00000637837 67 ntBASIC3.48□□□□□ -1.85
PPP4R4Q6NUP7 AL732372.2-225ENST00000642124 456 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms