Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC009237.15-201ENST00000610252 501 ntBASIC0.74□□□□□ -2.29
CKS1BP61024 AL157834.3-201ENST00000615543 103 ntBASIC0.74□□□□□ -2.29
CKS1BP61024 RMST_10.1-201ENST00000616309 154 ntBASIC0.74□□□□□ -2.29
CKS1BP61024 AC097655.1-201ENST00000635075 318 ntBASIC0.74□□□□□ -2.29
CKS1BP61024 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CKS1BP61024 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
CKS1BP61024 MFSD8-213ENST00000641134 1327 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 Y_RNA.99-201ENST00000363138 105 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 RNU6-1167P-201ENST00000363227 94 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 SNORD56.4-201ENST00000363883 71 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 RNU6-968P-201ENST00000384076 107 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 MIR506-201ENST00000384998 124 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.73□□□□□ -2.29
CKS1BP61024 BTF3L4P3-201ENST00000418879 476 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 OOSP1P1-201ENST00000423265 274 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.73□□□□□ -2.29
CKS1BP61024 JTBP1-201ENST00000441314 247 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 RPL23AP76-201ENST00000441860 458 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 RPS4XP11-201ENST00000446897 772 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 MTCYBP11-201ENST00000447254 1109 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CKS1BP61024 RPL31P3-201ENST00000458430 332 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 SNORA59A-201ENST00000459326 152 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 RPL9P9-202ENST00000466501 579 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.73□□□□□ -2.29
CKS1BP61024 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.73□□□□□ -2.29
CKS1BP61024 MTND5P13-201ENST00000513046 1079 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.73□□□□□ -2.29
CKS1BP61024 AP003392.2-201ENST00000527269 208 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 AC022616.8-201ENST00000533569 253 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 MIR4661-201ENST00000582720 75 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.73□□□□□ -2.29
CKS1BP61024 AL020996.3-201ENST00000606617 222 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 AL133445.2-201ENST00000611191 527 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 MIR6134-201ENST00000617606 109 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 AL353770.2-201ENST00000620024 78 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 AC132825.7-201ENST00000638744 335 ntBASIC0.73□□□□□ -2.29
CKS1BP61024 RNU6-492P-201ENST00000363035 104 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 RNU1-36P-201ENST00000365130 165 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 Y_RNA.548-201ENST00000384656 105 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.72□□□□□ -2.29
CKS1BP61024 LUZP4P1-201ENST00000415420 344 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.72□□□□□ -2.29
CKS1BP61024 EIF1P1-201ENST00000421436 341 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 RPL36AP53-201ENST00000432891 316 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 AC104058.1-201ENST00000448028 297 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 RPL23AP35-201ENST00000451906 501 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 MTND2P6-201ENST00000455337 1030 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 AC087343.1-201ENST00000477341 475 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 HMGN1P13-201ENST00000505795 138 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 AC116655.1-201ENST00000508324 901 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.72□□□□□ -2.29
CKS1BP61024 RPL23AP94-201ENST00000512518 302 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.72□□□□□ -2.29
CKS1BP61024 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.72□□□□□ -2.29
CKS1BP61024 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.72□□□□□ -2.29
CKS1BP61024 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.72□□□□□ -2.29
CKS1BP61024 AC093249.1-201ENST00000567049 203 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 MIR3937-201ENST00000580135 106 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 AP000860.1-201ENST00000605250 559 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 AC096772.1-201ENST00000609146 564 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 MIR6078-201ENST00000611069 100 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 uc_338.12-201ENST00000616344 181 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 AC099654.5-201ENST00000636479 350 ntBASIC0.72□□□□□ -2.29
CKS1BP61024 RNU6-1280P-201ENST00000365211 107 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
CKS1BP61024 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
CKS1BP61024 AC008267.5-201ENST00000424928 265 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 COX6CP18-201ENST00000448769 222 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 OR6C5P-201ENST00000452388 923 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 FABP5P15-201ENST00000453566 214 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.71□□□□□ -2.3
CKS1BP61024 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.71□□□□□ -2.3
CKS1BP61024 RPL26P26-201ENST00000480251 434 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 AC093852.1-201ENST00000503587 266 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 AC091917.2-201ENST00000505002 744 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 YWHAEP4-201ENST00000505390 198 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 AC091860.1-201ENST00000505723 432 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 AC108078.1-201ENST00000508073 725 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.71□□□□□ -2.3
CKS1BP61024 AC112198.4-201ENST00000515450 351 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 AC087441.2-201ENST00000529141 262 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.71□□□□□ -2.3
CKS1BP61024 AC136619.2-201ENST00000563361 631 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 AC233266.2-201ENST00000567067 528 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 MIR4653-201ENST00000585107 83 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 AL391646.1-201ENST00000603860 190 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 AC025811.1-201ENST00000604312 472 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 AC098614.4-201ENST00000607601 462 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 AL391813.2-201ENST00000609113 322 ntBASIC0.71□□□□□ -2.3
CKS1BP61024 DDX43P2-201ENST00000604753 1354 ntBASIC0.7□□□□□ -2.3
CKS1BP61024 RNU1-17P-201ENST00000363022 152 ntBASIC0.7□□□□□ -2.3
CKS1BP61024 AC119751.3-201ENST00000399720 670 ntBASIC0.7□□□□□ -2.3
CKS1BP61024 AL133475.1-201ENST00000404414 305 ntBASIC0.7□□□□□ -2.3
CKS1BP61024 AC069282.1-201ENST00000411911 526 ntBASIC0.7□□□□□ -2.3
CKS1BP61024 MTCO2P5-201ENST00000422621 426 ntBASIC0.7□□□□□ -2.3
CKS1BP61024 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.7□□□□□ -2.3
CKS1BP61024 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.7□□□□□ -2.3
CKS1BP61024 GPM6BP2-201ENST00000432046 144 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms