Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 HMGB1P27-201ENST00000431429 603 ntBASIC2.53□□□□□ -2
PEX3P56589 GPM6BP2-201ENST00000432046 144 ntBASIC2.53□□□□□ -2
PEX3P56589 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.53□□□□□ -2
PEX3P56589 DDX3P2-201ENST00000446138 111 ntBASIC2.53□□□□□ -2
PEX3P56589 GPM6BP1-201ENST00000446387 144 ntBASIC2.53□□□□□ -2
PEX3P56589 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.53□□□□□ -2
PEX3P56589 RNU7-23P-201ENST00000459465 62 ntBASIC2.53□□□□□ -2
PEX3P56589 MRPS17P3-201ENST00000465453 385 ntBASIC2.53□□□□□ -2
PEX3P56589 HMGB1P29-201ENST00000505659 499 ntBASIC2.53□□□□□ -2
PEX3P56589 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
PEX3P56589 RPL37P25-201ENST00000507308 276 ntBASIC2.53□□□□□ -2
PEX3P56589 AC117522.1-201ENST00000509821 380 ntBASIC2.53□□□□□ -2
PEX3P56589 AC108078.2-201ENST00000510750 236 ntBASIC2.53□□□□□ -2
PEX3P56589 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.53□□□□□ -2
PEX3P56589 RNU6-703P-201ENST00000516946 107 ntBASIC2.53□□□□□ -2
PEX3P56589 RNU6-685P-201ENST00000517088 95 ntBASIC2.53□□□□□ -2
PEX3P56589 RNA5SP165-201ENST00000517142 115 ntBASIC2.53□□□□□ -2
PEX3P56589 AC009902.1-201ENST00000519351 183 ntBASIC2.53□□□□□ -2
PEX3P56589 MTCYBP20-201ENST00000524239 1129 ntBASIC2.53□□□□□ -2
PEX3P56589 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.53□□□□□ -2
PEX3P56589 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.53□□□□□ -2
PEX3P56589 AC098848.2-201ENST00000588023 330 ntBASIC2.53□□□□□ -2
PEX3P56589 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.53□□□□□ -2
PEX3P56589 AC073648.5-201ENST00000603502 305 ntBASIC2.53□□□□□ -2
PEX3P56589 NUTF2P8-201ENST00000604593 363 ntBASIC2.53□□□□□ -2
PEX3P56589 DUSP12P1-201ENST00000612874 516 ntBASIC2.53□□□□□ -2
PEX3P56589 AC012409.4-201ENST00000612923 249 ntBASIC2.53□□□□□ -2
PEX3P56589 AC073308.1-201ENST00000623696 305 ntBASIC2.53□□□□□ -2
PEX3P56589 AC009161.2-201ENST00000624626 138 ntBASIC2.53□□□□□ -2
PEX3P56589 MTND5P26-201ENST00000426018 1752 ntBASIC2.53□□□□□ -2
PEX3P56589 MTND5P17-201ENST00000418405 1603 ntBASIC2.53□□□□□ -2
PEX3P56589 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.53□□□□□ -2
PEX3P56589 ELF2P3-201ENST00000445099 1506 ntBASIC2.52□□□□□ -2.01
PEX3P56589 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.52□□□□□ -2.01
PEX3P56589 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
PEX3P56589 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
PEX3P56589 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PEX3P56589 SNORA75B-201ENST00000384053 137 ntBASIC2.52□□□□□ -2.01
PEX3P56589 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.52□□□□□ -2.01
PEX3P56589 MTCYBP5-201ENST00000423752 1135 ntBASIC2.52□□□□□ -2.01
PEX3P56589 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.52□□□□□ -2.01
PEX3P56589 RPL23AP49-201ENST00000492925 468 ntBASIC2.52□□□□□ -2.01
PEX3P56589 RPS27AP10-201ENST00000496103 208 ntBASIC2.52□□□□□ -2.01
PEX3P56589 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.52□□□□□ -2.01
PEX3P56589 AC116562.3-201ENST00000506136 177 ntBASIC2.52□□□□□ -2.01
PEX3P56589 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.52□□□□□ -2.01
PEX3P56589 RNA5SP82-201ENST00000516707 92 ntBASIC2.52□□□□□ -2.01
PEX3P56589 RNA5SP402-201ENST00000517148 110 ntBASIC2.52□□□□□ -2.01
PEX3P56589 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.52□□□□□ -2.01
PEX3P56589 AC068587.5-201ENST00000528506 175 ntBASIC2.52□□□□□ -2.01
PEX3P56589 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.52□□□□□ -2.01
PEX3P56589 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.52□□□□□ -2.01
PEX3P56589 AC008521.1-201ENST00000587471 187 ntBASIC2.52□□□□□ -2.01
PEX3P56589 AC078795.2-201ENST00000602835 1252 ntBASIC2.52□□□□□ -2.01
PEX3P56589 MIR15A-201ENST00000607334 83 ntBASIC2.52□□□□□ -2.01
PEX3P56589 MIR6766-201ENST00000622641 72 ntBASIC2.52□□□□□ -2.01
PEX3P56589 AC099654.7-201ENST00000635788 2127 ntBASIC2.52□□□□□ -2.01
PEX3P56589 Z99571.1-201ENST00000636677 394 ntBASIC2.52□□□□□ -2.01
PEX3P56589 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PEX3P56589 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.51□□□□□ -2.01
PEX3P56589 Y_RNA.41-201ENST00000362646 102 ntBASIC2.51□□□□□ -2.01
PEX3P56589 RNU6-884P-201ENST00000363889 107 ntBASIC2.51□□□□□ -2.01
PEX3P56589 RN7SKP226-201ENST00000364912 300 ntBASIC2.51□□□□□ -2.01
PEX3P56589 RNU6-1180P-201ENST00000364935 107 ntBASIC2.51□□□□□ -2.01
PEX3P56589 RNA5SP126-201ENST00000365092 109 ntBASIC2.51□□□□□ -2.01
PEX3P56589 RNU6-641P-201ENST00000384006 107 ntBASIC2.51□□□□□ -2.01
PEX3P56589 MIR454-201ENST00000390180 115 ntBASIC2.51□□□□□ -2.01
PEX3P56589 AL591416.1-201ENST00000404015 867 ntBASIC2.51□□□□□ -2.01
PEX3P56589 BTF3P7-201ENST00000407097 488 ntBASIC2.51□□□□□ -2.01
PEX3P56589 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.51□□□□□ -2.01
PEX3P56589 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.51□□□□□ -2.01
PEX3P56589 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.51□□□□□ -2.01
PEX3P56589 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.51□□□□□ -2.01
PEX3P56589 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.51□□□□□ -2.01
PEX3P56589 AC010486.1-201ENST00000511793 424 ntBASIC2.51□□□□□ -2.01
PEX3P56589 SNORA31.11-201ENST00000516528 139 ntBASIC2.51□□□□□ -2.01
PEX3P56589 Y_RNA.689-201ENST00000516589 107 ntBASIC2.51□□□□□ -2.01
PEX3P56589 RNU6-1315P-201ENST00000517187 99 ntBASIC2.51□□□□□ -2.01
PEX3P56589 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.51□□□□□ -2.01
PEX3P56589 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.51□□□□□ -2.01
PEX3P56589 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.51□□□□□ -2.01
PEX3P56589 HMGN2P15-201ENST00000585707 270 ntBASIC2.51□□□□□ -2.01
PEX3P56589 AL139286.2-201ENST00000606838 396 ntBASIC2.51□□□□□ -2.01
PEX3P56589 AC011890.2-201ENST00000613393 294 ntBASIC2.51□□□□□ -2.01
PEX3P56589 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.51□□□□□ -2.01
PEX3P56589 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.51□□□□□ -2.01
PEX3P56589 MTND5P6-201ENST00000422338 1798 ntBASIC2.51□□□□□ -2.01
PEX3P56589 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
PEX3P56589 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PEX3P56589 SNORA4.3-201ENST00000365564 137 ntBASIC2.5□□□□□ -2.01
PEX3P56589 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PEX3P56589 RNU6-259P-201ENST00000383999 107 ntBASIC2.5□□□□□ -2.01
PEX3P56589 GSTA9P-201ENST00000406231 611 ntBASIC2.5□□□□□ -2.01
PEX3P56589 RNU2-68P-201ENST00000410878 191 ntBASIC2.5□□□□□ -2.01
PEX3P56589 AC023141.4-201ENST00000412031 328 ntBASIC2.5□□□□□ -2.01
PEX3P56589 EEF1A1P40-201ENST00000412883 573 ntBASIC2.5□□□□□ -2.01
PEX3P56589 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.5□□□□□ -2.01
PEX3P56589 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.5□□□□□ -2.01
PEX3P56589 RPL26P27-201ENST00000414397 437 ntBASIC2.5□□□□□ -2.01
PEX3P56589 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms