Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RNU6-718P-201ENST00000516166 105 ntBASIC2.75□□□□□ -1.97
PDX1P52945 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.75□□□□□ -1.97
PDX1P52945 AC025755.1-201ENST00000521306 278 ntBASIC2.75□□□□□ -1.97
PDX1P52945 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.75□□□□□ -1.97
PDX1P52945 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.75□□□□□ -1.97
PDX1P52945 HIF1AP1-201ENST00000553642 175 ntBASIC2.75□□□□□ -1.97
PDX1P52945 AC025678.1-201ENST00000567861 338 ntBASIC2.75□□□□□ -1.97
PDX1P52945 MIR1273C-201ENST00000578669 77 ntBASIC2.75□□□□□ -1.97
PDX1P52945 MIR4506-201ENST00000584693 77 ntBASIC2.75□□□□□ -1.97
PDX1P52945 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.75□□□□□ -1.97
PDX1P52945 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.75□□□□□ -1.97
PDX1P52945 AL138889.2-201ENST00000603883 242 ntBASIC2.75□□□□□ -1.97
PDX1P52945 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.75□□□□□ -1.97
PDX1P52945 AC004832.5-201ENST00000608677 401 ntBASIC2.75□□□□□ -1.97
PDX1P52945 U4.5-201ENST00000617137 123 ntBASIC2.75□□□□□ -1.97
PDX1P52945 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.75□□□□□ -1.97
PDX1P52945 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.75□□□□□ -1.97
PDX1P52945 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PDX1P52945 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
PDX1P52945 MTND5P7-201ENST00000413558 1798 ntBASIC2.74□□□□□ -1.97
PDX1P52945 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
PDX1P52945 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.74□□□□□ -1.97
PDX1P52945 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.74□□□□□ -1.97
PDX1P52945 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.74□□□□□ -1.97
PDX1P52945 Y_RNA.255-201ENST00000364581 97 ntBASIC2.74□□□□□ -1.97
PDX1P52945 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
PDX1P52945 XGY1-201ENST00000381172 446 ntBASIC2.74□□□□□ -1.97
PDX1P52945 MIR301A-201ENST00000385261 86 ntBASIC2.74□□□□□ -1.97
PDX1P52945 AL354719.1-201ENST00000406535 843 ntBASIC2.74□□□□□ -1.97
PDX1P52945 OOSP1P1-201ENST00000423265 274 ntBASIC2.74□□□□□ -1.97
PDX1P52945 AL353729.1-201ENST00000425044 720 ntBASIC2.74□□□□□ -1.97
PDX1P52945 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.74□□□□□ -1.97
PDX1P52945 AC093151.1-201ENST00000427711 313 ntBASIC2.74□□□□□ -1.97
PDX1P52945 AL669831.1-202ENST00000428504 417 ntBASIC2.74□□□□□ -1.97
PDX1P52945 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.74□□□□□ -1.97
PDX1P52945 UBE2V1P8-201ENST00000437166 265 ntBASIC2.74□□□□□ -1.97
PDX1P52945 GTF2IP13-201ENST00000438487 386 ntBASIC2.74□□□□□ -1.97
PDX1P52945 RPL32P28-201ENST00000443577 397 ntBASIC2.74□□□□□ -1.97
PDX1P52945 AC003071.1-201ENST00000451219 789 ntBASIC2.74□□□□□ -1.97
PDX1P52945 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.74□□□□□ -1.97
PDX1P52945 RPS15AP34-201ENST00000487776 387 ntBASIC2.74□□□□□ -1.97
PDX1P52945 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.74□□□□□ -1.97
PDX1P52945 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.74□□□□□ -1.97
PDX1P52945 RNU4-29P-201ENST00000515943 174 ntBASIC2.74□□□□□ -1.97
PDX1P52945 RNU6-572P-201ENST00000516724 80 ntBASIC2.74□□□□□ -1.97
PDX1P52945 RNU6-703P-201ENST00000516946 107 ntBASIC2.74□□□□□ -1.97
PDX1P52945 SNORA31.19-201ENST00000517079 126 ntBASIC2.74□□□□□ -1.97
PDX1P52945 SNORA31.21-201ENST00000517180 77 ntBASIC2.74□□□□□ -1.97
PDX1P52945 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.74□□□□□ -1.97
PDX1P52945 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.74□□□□□ -1.97
PDX1P52945 OR5AQ1P-201ENST00000527596 927 ntBASIC2.74□□□□□ -1.97
PDX1P52945 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.74□□□□□ -1.97
PDX1P52945 AL512310.1-201ENST00000548639 172 ntBASIC2.74□□□□□ -1.97
PDX1P52945 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.74□□□□□ -1.97
PDX1P52945 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.74□□□□□ -1.97
PDX1P52945 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.74□□□□□ -1.97
PDX1P52945 MIR548AC-201ENST00000585049 88 ntBASIC2.74□□□□□ -1.97
PDX1P52945 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.74□□□□□ -1.97
PDX1P52945 AC073539.2-201ENST00000597113 165 ntBASIC2.74□□□□□ -1.97
PDX1P52945 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
PDX1P52945 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
PDX1P52945 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
PDX1P52945 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PDX1P52945 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
PDX1P52945 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PDX1P52945 RNU6-715P-201ENST00000365204 103 ntBASIC2.73□□□□□ -1.97
PDX1P52945 RNU6-395P-201ENST00000365662 106 ntBASIC2.73□□□□□ -1.97
PDX1P52945 Z98749.2-208ENST00000381646 500 ntBASIC2.73□□□□□ -1.97
PDX1P52945 RNU6-1127P-201ENST00000384580 107 ntBASIC2.73□□□□□ -1.97
PDX1P52945 RNU6-658P-201ENST00000384606 106 ntBASIC2.73□□□□□ -1.97
PDX1P52945 MIR34A-201ENST00000385130 110 ntBASIC2.73□□□□□ -1.97
PDX1P52945 SNORD115-47-201ENST00000391226 86 ntBASIC2.73□□□□□ -1.97
PDX1P52945 AL445529.1-201ENST00000398713 389 ntBASIC2.73□□□□□ -1.97
PDX1P52945 RNU6-648P-201ENST00000410190 107 ntBASIC2.73□□□□□ -1.97
PDX1P52945 RNU2-29P-201ENST00000410423 189 ntBASIC2.73□□□□□ -1.97
PDX1P52945 FCF1P9-201ENST00000412546 282 ntBASIC2.73□□□□□ -1.97
PDX1P52945 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.73□□□□□ -1.97
PDX1P52945 RPL26P27-201ENST00000414397 437 ntBASIC2.73□□□□□ -1.97
PDX1P52945 AC098614.2-201ENST00000426040 255 ntBASIC2.73□□□□□ -1.97
PDX1P52945 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.73□□□□□ -1.97
PDX1P52945 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.73□□□□□ -1.97
PDX1P52945 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.73□□□□□ -1.97
PDX1P52945 RNU7-180P-201ENST00000459240 63 ntBASIC2.73□□□□□ -1.97
PDX1P52945 RNU6-261P-201ENST00000459506 102 ntBASIC2.73□□□□□ -1.97
PDX1P52945 CCDC34P1-201ENST00000507441 517 ntBASIC2.73□□□□□ -1.97
PDX1P52945 AC010486.1-201ENST00000511793 424 ntBASIC2.73□□□□□ -1.97
PDX1P52945 RNU6-1281P-201ENST00000516223 105 ntBASIC2.73□□□□□ -1.97
PDX1P52945 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.73□□□□□ -1.97
PDX1P52945 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PDX1P52945 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.73□□□□□ -1.97
PDX1P52945 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.73□□□□□ -1.97
PDX1P52945 ZNF519P2-201ENST00000557032 169 ntBASIC2.73□□□□□ -1.97
PDX1P52945 AC136619.2-201ENST00000563361 631 ntBASIC2.73□□□□□ -1.97
PDX1P52945 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.73□□□□□ -1.97
PDX1P52945 AP003465.2-201ENST00000602571 373 ntBASIC2.73□□□□□ -1.97
PDX1P52945 NUTF2P8-201ENST00000604593 363 ntBASIC2.73□□□□□ -1.97
PDX1P52945 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PDX1P52945 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PDX1P52945 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.73□□□□□ -1.97
PDX1P52945 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms