Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RNU6-371P-201ENST00000364283 108 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 MIR578-201ENST00000384828 96 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 MIR518D-201ENST00000385014 87 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 MIR10A-201ENST00000385043 110 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 DEFB108C-201ENST00000400154 252 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 RPL21P90-201ENST00000415692 466 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXD13P35453 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXD13P35453 FABP5P14-201ENST00000437273 393 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 RPS15AP9-201ENST00000439856 381 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 AL445687.1-201ENST00000439946 251 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.92□□□□□ -1.94
HOXD13P35453 RPS29P15-201ENST00000458329 171 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.92□□□□□ -1.94
HOXD13P35453 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 AC105417.1-201ENST00000514691 285 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 RNA5SP112-201ENST00000515937 99 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 BTF3P12-201ENST00000519620 469 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HOXD13P35453 FAM92A1P1-201ENST00000528023 890 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.92□□□□□ -1.94
HOXD13P35453 AC024909.2-201ENST00000553035 286 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.92□□□□□ -1.94
HOXD13P35453 AP005136.1-201ENST00000579765 429 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 LARP7P3-201ENST00000579888 337 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.92□□□□□ -1.94
HOXD13P35453 AC005609.4-201ENST00000625071 447 ntBASIC2.92□□□□□ -1.94
HOXD13P35453 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
HOXD13P35453 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXD13P35453 RNU1-100P-201ENST00000365255 165 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 RNU6-1029P-201ENST00000384109 107 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 RNU6-1119P-201ENST00000384349 108 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 RNU6-550P-201ENST00000391057 101 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 RPL21P75-201ENST00000396599 483 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 RPL21P28-201ENST00000401418 483 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 AL592114.1-201ENST00000403842 483 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 RAP1BP3-201ENST00000407180 549 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 RNU2-52P-201ENST00000410680 190 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 RNA5SP492-201ENST00000411330 114 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXD13P35453 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.91□□□□□ -1.94
HOXD13P35453 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXD13P35453 MICF-203ENST00000432679 129 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 RPL23AP20-201ENST00000447965 421 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXD13P35453 GSTA11P-201ENST00000452866 669 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXD13P35453 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXD13P35453 RPL21P39-201ENST00000463605 483 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 RPL21P93-201ENST00000480465 489 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 AC087190.1-201ENST00000484462 480 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 AC093591.1-201ENST00000491435 481 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXD13P35453 RPL21P16-201ENST00000495531 483 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 HMGB1P29-201ENST00000505659 499 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 AP003392.2-201ENST00000527269 208 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 HSPE1P20-201ENST00000538133 289 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 MIR4635-201ENST00000583759 79 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 ELOCP29-201ENST00000588193 334 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.91□□□□□ -1.94
HOXD13P35453 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXD13P35453 AL356280.1-201ENST00000603614 379 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 SCARNA4-202ENST00000625402 129 ntBASIC2.91□□□□□ -1.94
HOXD13P35453 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.91□□□□□ -1.94
HOXD13P35453 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HOXD13P35453 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
HOXD13P35453 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.94
HOXD13P35453 MTND4P27-201ENST00000450813 1354 ntBASIC2.9□□□□□ -1.94
HOXD13P35453 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
HOXD13P35453 AL109809.4-201ENST00000603520 2185 ntBASIC2.9□□□□□ -1.94
HOXD13P35453 RNU6-858P-201ENST00000362436 107 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 RNU6-486P-201ENST00000363116 107 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 SNORD14B-201ENST00000364533 90 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 SNORA75B-201ENST00000384053 137 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 RNU6-1103P-201ENST00000384150 107 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 RNU2-9P-201ENST00000410194 145 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 EEF1A1P40-201ENST00000412883 573 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 AL031779.1-201ENST00000415663 330 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 COTL1P1-201ENST00000422309 375 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.9□□□□□ -1.95
HOXD13P35453 AC002486.1-201ENST00000435098 391 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXD13P35453 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.9□□□□□ -1.95
HOXD13P35453 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXD13P35453 HIGD1AP2-201ENST00000446367 280 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 RPL23AP11-201ENST00000475260 469 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HOXD13P35453 AC114781.4-201ENST00000513707 639 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 LRRC34P2-201ENST00000514850 553 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 SNORA31.6-201ENST00000516241 130 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 RPPH1-2P-201ENST00000516688 293 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXD13P35453 AP004607.1-201ENST00000524456 203 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXD13P35453 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.9□□□□□ -1.95
HOXD13P35453 MTCO3P13-201ENST00000577757 781 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 AC087683.1-201ENST00000591187 441 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 AC008121.1-201ENST00000603244 268 ntBASIC2.9□□□□□ -1.95
HOXD13P35453 AL670379.10-201ENST00000604330 253 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms