Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXD12P35452 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXD12P35452 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
HOXD12P35452 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXD12P35452 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HOXD12P35452 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXD12P35452 RNU1-75P-201ENST00000347264 129 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 RNA5SP374-201ENST00000362939 125 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 RNU6-82P-201ENST00000363970 107 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 RNU6-694P-201ENST00000364071 147 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 RNU6-512P-201ENST00000364438 103 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 RNU6-715P-201ENST00000365204 103 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 RNU6-393P-201ENST00000384475 107 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 RNU6-831P-201ENST00000384548 107 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 POLHP1-201ENST00000411806 470 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 AC126124.2-201ENST00000413542 321 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXD12P35452 AL591704.1-201ENST00000432574 275 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXD12P35452 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXD12P35452 RPL21P93-201ENST00000480465 489 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 RN7SL283P-201ENST00000489055 303 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.41□□□□□ -1.86
HOXD12P35452 APOOP4-201ENST00000513530 597 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 RNU6-914P-201ENST00000516749 109 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXD12P35452 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.41□□□□□ -1.86
HOXD12P35452 OR11H5P-201ENST00000554039 926 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 EIF4BP1-201ENST00000554881 351 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXD12P35452 AC005668.1-201ENST00000571142 476 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 RPS3AP23-202ENST00000574601 686 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 MIR4742-201ENST00000581069 85 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 AC243960.4-201ENST00000600532 288 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 AC092747.3-201ENST00000603769 301 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 AC073657.2-201ENST00000605661 303 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 DUSP12P1-201ENST00000612874 516 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 AC022140.2-201ENST00000623500 188 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 AP003400.5-201ENST00000624827 617 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 AC112487.2-201ENST00000637950 304 ntBASIC3.41□□□□□ -1.86
HOXD12P35452 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXD12P35452 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXD12P35452 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HOXD12P35452 FRG1CP-201ENST00000358464 769 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 MIR148B-201ENST00000362252 99 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 RNU6-1167P-201ENST00000363227 94 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 RNU6-140P-201ENST00000384566 108 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 MIR1289-1-201ENST00000408836 144 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 AL592045.1-201ENST00000429867 352 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 AL714022.1-201ENST00000439897 151 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXD12P35452 MRPL50P4-201ENST00000446432 475 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 RNU6-329P-201ENST00000459618 107 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 RPS15AP34-201ENST00000487776 387 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.4□□□□□ -1.87
HOXD12P35452 AC103851.1-201ENST00000506833 274 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXD12P35452 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXD12P35452 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.4□□□□□ -1.87
HOXD12P35452 AP000763.2-201ENST00000540641 163 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 AC026464.5-201ENST00000562497 722 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
HOXD12P35452 LARP7P3-201ENST00000579888 337 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 MIR4506-201ENST00000584693 77 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 AC005498.1-201ENST00000592125 465 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 AC098826.3-201ENST00000603823 466 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 CTHRC1P1-201ENST00000605383 469 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 AC021646.1-201ENST00000605469 484 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXD12P35452 Z82243.1-201ENST00000609432 473 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.4□□□□□ -1.87
HOXD12P35452 MIR6852-201ENST00000621699 66 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 AC110079.1-202ENST00000635213 138 ntBASIC3.4□□□□□ -1.87
HOXD12P35452 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
HOXD12P35452 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HOXD12P35452 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HOXD12P35452 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HOXD12P35452 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXD12P35452 RNU4-73P-201ENST00000363164 141 ntBASIC3.39□□□□□ -1.87
HOXD12P35452 Y_RNA.167-201ENST00000363735 109 ntBASIC3.39□□□□□ -1.87
HOXD12P35452 U3.12-201ENST00000364498 214 ntBASIC3.39□□□□□ -1.87
HOXD12P35452 RNU6-434P-201ENST00000384376 107 ntBASIC3.39□□□□□ -1.87
HOXD12P35452 Y_RNA.530-201ENST00000384587 101 ntBASIC3.39□□□□□ -1.87
HOXD12P35452 SNORA16.2-201ENST00000390991 127 ntBASIC3.39□□□□□ -1.87
HOXD12P35452 BX682237.1-201ENST00000415016 335 ntBASIC3.39□□□□□ -1.87
HOXD12P35452 NDUFB1P1-201ENST00000435191 180 ntBASIC3.39□□□□□ -1.87
HOXD12P35452 UBE2V1P7-201ENST00000446395 340 ntBASIC3.39□□□□□ -1.87
HOXD12P35452 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXD12P35452 AMD1P1-201ENST00000457220 922 ntBASIC3.39□□□□□ -1.87
HOXD12P35452 PPP1R2P5-201ENST00000457256 603 ntBASIC3.39□□□□□ -1.87
HOXD12P35452 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXD12P35452 AC109925.1-201ENST00000478069 331 ntBASIC3.39□□□□□ -1.87
HOXD12P35452 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.39□□□□□ -1.87
HOXD12P35452 RAC1P5-201ENST00000512182 576 ntBASIC3.39□□□□□ -1.87
HOXD12P35452 RNU6-189P-201ENST00000516120 101 ntBASIC3.39□□□□□ -1.87
HOXD12P35452 RNU6-143P-201ENST00000516942 93 ntBASIC3.39□□□□□ -1.87
HOXD12P35452 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.39□□□□□ -1.87
HOXD12P35452 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms