Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNY3P11-201ENST00000364153 102 ntBASIC3.58□□□□□ -1.84
CD40P25942 RNA5SP513-201ENST00000364648 118 ntBASIC3.58□□□□□ -1.84
CD40P25942 RNA5SP283-201ENST00000365604 119 ntBASIC3.58□□□□□ -1.84
CD40P25942 RNU6-198P-201ENST00000384258 104 ntBASIC3.58□□□□□ -1.84
CD40P25942 RNU6-784P-201ENST00000384330 106 ntBASIC3.58□□□□□ -1.84
CD40P25942 RPL21P65-201ENST00000406094 466 ntBASIC3.58□□□□□ -1.84
CD40P25942 RNU6-1245P-201ENST00000411130 106 ntBASIC3.58□□□□□ -1.84
CD40P25942 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.58□□□□□ -1.84
CD40P25942 RPL7P2-201ENST00000427639 268 ntBASIC3.58□□□□□ -1.84
CD40P25942 AC096644.2-201ENST00000429278 159 ntBASIC3.58□□□□□ -1.84
CD40P25942 AC092423.1-201ENST00000430165 186 ntBASIC3.58□□□□□ -1.84
CD40P25942 AC243964.1-201ENST00000441814 261 ntBASIC3.58□□□□□ -1.84
CD40P25942 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.58□□□□□ -1.84
CD40P25942 AC015911.1-201ENST00000495111 156 ntBASIC3.58□□□□□ -1.84
CD40P25942 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.58□□□□□ -1.84
CD40P25942 AC100770.1-201ENST00000532310 322 ntBASIC3.58□□□□□ -1.84
CD40P25942 CR383656.8-201ENST00000549046 145 ntBASIC3.58□□□□□ -1.84
CD40P25942 SNORD58B-201ENST00000607313 66 ntBASIC3.58□□□□□ -1.84
CD40P25942 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.58□□□□□ -1.84
CD40P25942 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
CD40P25942 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CD40P25942 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CD40P25942 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.58□□□□□ -1.84
CD40P25942 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
CD40P25942 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.58□□□□□ -1.84
CD40P25942 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.58□□□□□ -1.84
CD40P25942 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CD40P25942 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CD40P25942 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CD40P25942 OTUD4P1-201ENST00000237841 3067 ntBASIC3.57□□□□□ -1.84
CD40P25942 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CD40P25942 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CD40P25942 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.57□□□□□ -1.84
CD40P25942 RNU6-1309P-201ENST00000363305 108 ntBASIC3.57□□□□□ -1.84
CD40P25942 RNU1-140P-201ENST00000365040 165 ntBASIC3.57□□□□□ -1.84
CD40P25942 RNU6-1105P-201ENST00000384774 107 ntBASIC3.57□□□□□ -1.84
CD40P25942 RNU6-700P-201ENST00000391043 107 ntBASIC3.57□□□□□ -1.84
CD40P25942 Y_RNA.645-201ENST00000391229 102 ntBASIC3.57□□□□□ -1.84
CD40P25942 HDGFP1-201ENST00000405943 252 ntBASIC3.57□□□□□ -1.84
CD40P25942 RNA5SP44-201ENST00000410446 133 ntBASIC3.57□□□□□ -1.84
CD40P25942 AC074117.2-201ENST00000417130 397 ntBASIC3.57□□□□□ -1.84
CD40P25942 ZNF72P-201ENST00000425869 1908 ntBASIC3.57□□□□□ -1.84
CD40P25942 AL714022.1-201ENST00000439897 151 ntBASIC3.57□□□□□ -1.84
CD40P25942 AC006011.1-201ENST00000442758 349 ntBASIC3.57□□□□□ -1.84
CD40P25942 CHEK2P4-201ENST00000450340 246 ntBASIC3.57□□□□□ -1.84
CD40P25942 U3.44-201ENST00000458938 192 ntBASIC3.57□□□□□ -1.84
CD40P25942 AC034236.1-201ENST00000469891 373 ntBASIC3.57□□□□□ -1.84
CD40P25942 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.57□□□□□ -1.84
CD40P25942 AC009812.2-201ENST00000517657 457 ntBASIC3.57□□□□□ -1.84
CD40P25942 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CD40P25942 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.57□□□□□ -1.84
CD40P25942 HSBP1P1-201ENST00000555205 166 ntBASIC3.57□□□□□ -1.84
CD40P25942 MIR5701-3-201ENST00000578890 82 ntBASIC3.57□□□□□ -1.84
CD40P25942 MIR5701-1-201ENST00000585138 82 ntBASIC3.57□□□□□ -1.84
CD40P25942 AC104695.3-201ENST00000604052 296 ntBASIC3.57□□□□□ -1.84
CD40P25942 MIR5701-2-201ENST00000615634 82 ntBASIC3.57□□□□□ -1.84
CD40P25942 AL138880.2-201ENST00000616214 239 ntBASIC3.57□□□□□ -1.84
CD40P25942 MIR7151-201ENST00000617477 60 ntBASIC3.57□□□□□ -1.84
CD40P25942 AC024581.2-201ENST00000619986 252 ntBASIC3.57□□□□□ -1.84
CD40P25942 AC006111.3-201ENST00000622137 383 ntBASIC3.57□□□□□ -1.84
CD40P25942 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CD40P25942 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.57□□□□□ -1.84
CD40P25942 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.57□□□□□ -1.84
CD40P25942 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.57□□□□□ -1.84
CD40P25942 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CD40P25942 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.56□□□□□ -1.84
CD40P25942 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CD40P25942 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CD40P25942 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CD40P25942 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CD40P25942 SNORA60-201ENST00000362396 134 ntBASIC3.56□□□□□ -1.84
CD40P25942 RNU4-42P-201ENST00000364738 142 ntBASIC3.56□□□□□ -1.84
CD40P25942 RNU1-64P-201ENST00000365443 163 ntBASIC3.56□□□□□ -1.84
CD40P25942 MIR625-201ENST00000385047 85 ntBASIC3.56□□□□□ -1.84
CD40P25942 RNA5SP252-201ENST00000391131 119 ntBASIC3.56□□□□□ -1.84
CD40P25942 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CD40P25942 RNA5SP494-201ENST00000410653 129 ntBASIC3.56□□□□□ -1.84
CD40P25942 AL358176.2-201ENST00000425769 204 ntBASIC3.56□□□□□ -1.84
CD40P25942 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.56□□□□□ -1.84
CD40P25942 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.56□□□□□ -1.84
CD40P25942 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.56□□□□□ -1.84
CD40P25942 RPS15AP5-201ENST00000436276 388 ntBASIC3.56□□□□□ -1.84
CD40P25942 CEACAMP4-201ENST00000457676 421 ntBASIC3.56□□□□□ -1.84
CD40P25942 RNU7-169P-201ENST00000459456 61 ntBASIC3.56□□□□□ -1.84
CD40P25942 MTATP8P1-201ENST00000467115 207 ntBASIC3.56□□□□□ -1.84
CD40P25942 MED28P2-201ENST00000475771 317 ntBASIC3.56□□□□□ -1.84
CD40P25942 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.56□□□□□ -1.84
CD40P25942 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.56□□□□□ -1.84
CD40P25942 RNU7-4P-201ENST00000516961 62 ntBASIC3.56□□□□□ -1.84
CD40P25942 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.56□□□□□ -1.84
CD40P25942 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.56□□□□□ -1.84
CD40P25942 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.56□□□□□ -1.84
CD40P25942 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.56□□□□□ -1.84
CD40P25942 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.56□□□□□ -1.84
CD40P25942 AC009163.5-201ENST00000575421 637 ntBASIC3.56□□□□□ -1.84
CD40P25942 MIR4286-201ENST00000580651 93 ntBASIC3.56□□□□□ -1.84
CD40P25942 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.56□□□□□ -1.84
CD40P25942 AP000942.4-201ENST00000604811 241 ntBASIC3.56□□□□□ -1.84
CD40P25942 AC019159.1-201ENST00000605094 187 ntBASIC3.56□□□□□ -1.84
CD40P25942 MIR7702-201ENST00000621931 59 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms