Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.54□□□□□ -1.84
RHOP08100 MIR548AC-201ENST00000585049 88 ntBASIC3.54□□□□□ -1.84
RHOP08100 AC133104.2-201ENST00000615272 193 ntBASIC3.54□□□□□ -1.84
RHOP08100 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
RHOP08100 AC244517.12-201ENST00000623581 663 ntBASIC3.54□□□□□ -1.84
RHOP08100 AL353743.1-202ENST00000431724 1695 ntBASIC3.54□□□□□ -1.84
RHOP08100 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
RHOP08100 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.54□□□□□ -1.84
RHOP08100 AC006504.1-201ENST00000562493 3666 ntBASIC3.54□□□□□ -1.84
RHOP08100 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.54□□□□□ -1.84
RHOP08100 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.54□□□□□ -1.84
RHOP08100 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RHOP08100 AL672296.1-201ENST00000427780 2158 ntBASIC3.53□□□□□ -1.84
RHOP08100 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RHOP08100 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.53□□□□□ -1.84
RHOP08100 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
RHOP08100 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RHOP08100 UBE2L2-201ENST00000254302 429 ntBASIC3.53□□□□□ -1.84
RHOP08100 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RHOP08100 Y_RNA.445-201ENST00000384168 102 ntBASIC3.53□□□□□ -1.84
RHOP08100 MIR578-201ENST00000384828 96 ntBASIC3.53□□□□□ -1.84
RHOP08100 MIR606-201ENST00000384851 96 ntBASIC3.53□□□□□ -1.84
RHOP08100 HMGN2P8-201ENST00000391458 268 ntBASIC3.53□□□□□ -1.84
RHOP08100 MIR1290-201ENST00000408735 78 ntBASIC3.53□□□□□ -1.84
RHOP08100 AC245054.2-201ENST00000415639 319 ntBASIC3.53□□□□□ -1.84
RHOP08100 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RHOP08100 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.53□□□□□ -1.84
RHOP08100 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.53□□□□□ -1.84
RHOP08100 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.53□□□□□ -1.84
RHOP08100 RPS24P13-201ENST00000442520 397 ntBASIC3.53□□□□□ -1.84
RHOP08100 RPL23AP31-201ENST00000456160 467 ntBASIC3.53□□□□□ -1.84
RHOP08100 RNA5SP468-201ENST00000516782 93 ntBASIC3.53□□□□□ -1.84
RHOP08100 RNA5SP471-201ENST00000516971 106 ntBASIC3.53□□□□□ -1.84
RHOP08100 RNU6-1315P-201ENST00000517187 99 ntBASIC3.53□□□□□ -1.84
RHOP08100 AC006504.6-201ENST00000590142 199 ntBASIC3.53□□□□□ -1.84
RHOP08100 AC002545.1-201ENST00000592511 181 ntBASIC3.53□□□□□ -1.84
RHOP08100 AL162713.1-201ENST00000604480 262 ntBASIC3.53□□□□□ -1.84
RHOP08100 AL161798.1-201ENST00000604630 131 ntBASIC3.53□□□□□ -1.84
RHOP08100 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.53□□□□□ -1.84
RHOP08100 AL355802.3-201ENST00000607571 545 ntBASIC3.53□□□□□ -1.84
RHOP08100 AL157817.1-201ENST00000614264 790 ntBASIC3.53□□□□□ -1.84
RHOP08100 AL355810.1-201ENST00000614629 552 ntBASIC3.53□□□□□ -1.84
RHOP08100 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.53□□□□□ -1.84
RHOP08100 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.53□□□□□ -1.84
RHOP08100 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RHOP08100 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.53□□□□□ -1.84
RHOP08100 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
RHOP08100 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
RHOP08100 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.52□□□□□ -1.85
RHOP08100 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RHOP08100 KPNA2P1-201ENST00000458289 1591 ntBASIC3.52□□□□□ -1.85
RHOP08100 AC073073.2-201ENST00000609827 2578 ntBASIC3.52□□□□□ -1.85
RHOP08100 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
RHOP08100 SNORD3E-201ENST00000362899 217 ntBASIC3.52□□□□□ -1.85
RHOP08100 RNU6-1167P-201ENST00000363227 94 ntBASIC3.52□□□□□ -1.85
RHOP08100 Y_RNA.112-201ENST00000363250 102 ntBASIC3.52□□□□□ -1.85
RHOP08100 SNORA63C-201ENST00000364578 129 ntBASIC3.52□□□□□ -1.85
RHOP08100 RNU6-1303P-201ENST00000364841 107 ntBASIC3.52□□□□□ -1.85
RHOP08100 SNORA33.2-201ENST00000365413 134 ntBASIC3.52□□□□□ -1.85
RHOP08100 RNU6-1160P-201ENST00000384546 104 ntBASIC3.52□□□□□ -1.85
RHOP08100 RNU6-607P-201ENST00000411283 108 ntBASIC3.52□□□□□ -1.85
RHOP08100 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.52□□□□□ -1.85
RHOP08100 AC063979.1-201ENST00000415539 377 ntBASIC3.52□□□□□ -1.85
RHOP08100 Z85995.1-201ENST00000415547 335 ntBASIC3.52□□□□□ -1.85
RHOP08100 RPL21P90-201ENST00000415692 466 ntBASIC3.52□□□□□ -1.85
RHOP08100 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.52□□□□□ -1.85
RHOP08100 MRPS31P2-201ENST00000451581 518 ntBASIC3.52□□□□□ -1.85
RHOP08100 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.52□□□□□ -1.85
RHOP08100 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.52□□□□□ -1.85
RHOP08100 RNU7-138P-201ENST00000459479 64 ntBASIC3.52□□□□□ -1.85
RHOP08100 AL163540.1-201ENST00000485382 386 ntBASIC3.52□□□□□ -1.85
RHOP08100 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.52□□□□□ -1.85
RHOP08100 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RHOP08100 AL359273.1-201ENST00000510918 627 ntBASIC3.52□□□□□ -1.85
RHOP08100 AC008716.1-201ENST00000511084 513 ntBASIC3.52□□□□□ -1.85
RHOP08100 RNU1-103P-201ENST00000516502 125 ntBASIC3.52□□□□□ -1.85
RHOP08100 RNU6-1332P-201ENST00000516666 104 ntBASIC3.52□□□□□ -1.85
RHOP08100 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.52□□□□□ -1.85
RHOP08100 AC026333.2-201ENST00000542164 106 ntBASIC3.52□□□□□ -1.85
RHOP08100 AC098826.3-201ENST00000603823 466 ntBASIC3.52□□□□□ -1.85
RHOP08100 AC002044.1-201ENST00000606707 158 ntBASIC3.52□□□□□ -1.85
RHOP08100 MIR486-1-201ENST00000612171 68 ntBASIC3.52□□□□□ -1.85
RHOP08100 uc_338.22-201ENST00000622722 187 ntBASIC3.52□□□□□ -1.85
RHOP08100 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.52□□□□□ -1.85
RHOP08100 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.52□□□□□ -1.85
RHOP08100 AL669831.3-213ENST00000636676 183 ntBASIC3.52□□□□□ -1.85
RHOP08100 Z99571.1-201ENST00000636677 394 ntBASIC3.52□□□□□ -1.85
RHOP08100 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RHOP08100 AC005183.1-201ENST00000603687 1979 ntBASIC3.52□□□□□ -1.85
RHOP08100 TNPO1P3-201ENST00000436471 2662 ntBASIC3.52□□□□□ -1.85
RHOP08100 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RHOP08100 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.51□□□□□ -1.85
RHOP08100 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RHOP08100 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RHOP08100 Y_RNA.216-201ENST00000364205 93 ntBASIC3.51□□□□□ -1.85
RHOP08100 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RHOP08100 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
RHOP08100 RNU6-95P-201ENST00000384697 107 ntBASIC3.51□□□□□ -1.85
RHOP08100 MIR301A-201ENST00000385261 86 ntBASIC3.51□□□□□ -1.85
RHOP08100 SNORA75.4-201ENST00000391278 119 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms