Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.75□□□□□ -2.29
HMGN1P05114 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.75□□□□□ -2.29
HMGN1P05114 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.75□□□□□ -2.29
HMGN1P05114 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.75□□□□□ -2.29
HMGN1P05114 MRPS36P5-201ENST00000551909 298 ntBASIC0.75□□□□□ -2.29
HMGN1P05114 CYP3A52P-201ENST00000563326 91 ntBASIC0.75□□□□□ -2.29
HMGN1P05114 LARP7P2-201ENST00000575306 125 ntBASIC0.75□□□□□ -2.29
HMGN1P05114 VN1R80P-201ENST00000597126 338 ntBASIC0.75□□□□□ -2.29
HMGN1P05114 FAM71BP1-201ENST00000604431 523 ntBASIC0.75□□□□□ -2.29
HMGN1P05114 AC112220.3-201ENST00000605502 502 ntBASIC0.75□□□□□ -2.29
HMGN1P05114 AC025754.2-201ENST00000606491 432 ntBASIC0.75□□□□□ -2.29
HMGN1P05114 AC004009.2-201ENST00000623016 728 ntBASIC0.75□□□□□ -2.29
HMGN1P05114 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.75□□□□□ -2.29
HMGN1P05114 AC099063.3-201ENST00000642066 185 ntBASIC0.75□□□□□ -2.29
HMGN1P05114 RNU6-619P-201ENST00000365146 108 ntBASIC0.74□□□□□ -2.29
HMGN1P05114 RNU6-658P-201ENST00000384606 106 ntBASIC0.74□□□□□ -2.29
HMGN1P05114 MIR515-2-201ENST00000384883 83 ntBASIC0.74□□□□□ -2.29
HMGN1P05114 MIR515-1-201ENST00000384884 83 ntBASIC0.74□□□□□ -2.29
HMGN1P05114 MIR100-201ENST00000385259 80 ntBASIC0.74□□□□□ -2.29
HMGN1P05114 RNU2-48P-201ENST00000410694 191 ntBASIC0.74□□□□□ -2.29
HMGN1P05114 RNU2-68P-201ENST00000410878 191 ntBASIC0.74□□□□□ -2.29
HMGN1P05114 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.74□□□□□ -2.29
HMGN1P05114 AL365400.1-201ENST00000431854 640 ntBASIC0.74□□□□□ -2.29
HMGN1P05114 RPS4XP11-201ENST00000446897 772 ntBASIC0.74□□□□□ -2.29
HMGN1P05114 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.74□□□□□ -2.29
HMGN1P05114 RPS3AP22-201ENST00000488297 769 ntBASIC0.74□□□□□ -2.29
HMGN1P05114 PSMC1P5-201ENST00000512850 177 ntBASIC0.74□□□□□ -2.29
HMGN1P05114 SNORD116-28-201ENST00000516123 91 ntBASIC0.74□□□□□ -2.29
HMGN1P05114 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.74□□□□□ -2.29
HMGN1P05114 AC011451.2-201ENST00000604303 598 ntBASIC0.74□□□□□ -2.29
HMGN1P05114 AC096586.1-201ENST00000610267 561 ntBASIC0.74□□□□□ -2.29
HMGN1P05114 AC138627.2-201ENST00000624202 601 ntBASIC0.74□□□□□ -2.29
HMGN1P05114 AL590396.4-201ENST00000636779 956 ntBASIC0.74□□□□□ -2.29
HMGN1P05114 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
HMGN1P05114 RNU2-32P-201ENST00000411193 191 ntBASIC0.73□□□□□ -2.29
HMGN1P05114 AC006461.1-201ENST00000412637 326 ntBASIC0.73□□□□□ -2.29
HMGN1P05114 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.73□□□□□ -2.29
HMGN1P05114 MTND1P28-201ENST00000435623 950 ntBASIC0.73□□□□□ -2.29
HMGN1P05114 FDX1P2-201ENST00000450769 375 ntBASIC0.73□□□□□ -2.29
HMGN1P05114 RPL23AP35-201ENST00000451906 501 ntBASIC0.73□□□□□ -2.29
HMGN1P05114 AC092001.1-201ENST00000453012 261 ntBASIC0.73□□□□□ -2.29
HMGN1P05114 CECR9-201ENST00000453421 199 ntBASIC0.73□□□□□ -2.29
HMGN1P05114 SNRPFP4-201ENST00000456366 242 ntBASIC0.73□□□□□ -2.29
HMGN1P05114 COX6CP14-201ENST00000469580 174 ntBASIC0.73□□□□□ -2.29
HMGN1P05114 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.73□□□□□ -2.29
HMGN1P05114 AC103851.1-201ENST00000506833 274 ntBASIC0.73□□□□□ -2.29
HMGN1P05114 AC048346.1-201ENST00000510247 144 ntBASIC0.73□□□□□ -2.29
HMGN1P05114 BNIP3P24-201ENST00000593398 557 ntBASIC0.73□□□□□ -2.29
HMGN1P05114 AC080078.3-201ENST00000605407 463 ntBASIC0.73□□□□□ -2.29
HMGN1P05114 AC233981.2-201ENST00000611524 1614 ntBASIC0.72□□□□□ -2.29
HMGN1P05114 HSBP1P2-201ENST00000299671 229 ntBASIC0.72□□□□□ -2.29
HMGN1P05114 RNU6-252P-201ENST00000363232 107 ntBASIC0.72□□□□□ -2.29
HMGN1P05114 MIR23A-201ENST00000385245 73 ntBASIC0.72□□□□□ -2.29
HMGN1P05114 TPMTP3-201ENST00000411928 735 ntBASIC0.72□□□□□ -2.29
HMGN1P05114 AC007435.1-201ENST00000421086 415 ntBASIC0.72□□□□□ -2.29
HMGN1P05114 MTCO3P5-201ENST00000433620 714 ntBASIC0.72□□□□□ -2.29
HMGN1P05114 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.72□□□□□ -2.29
HMGN1P05114 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.72□□□□□ -2.29
HMGN1P05114 RNU6-581P-201ENST00000516214 105 ntBASIC0.72□□□□□ -2.29
HMGN1P05114 AP000889.1-201ENST00000530968 660 ntBASIC0.72□□□□□ -2.29
HMGN1P05114 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.72□□□□□ -2.29
HMGN1P05114 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.72□□□□□ -2.29
HMGN1P05114 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.72□□□□□ -2.29
HMGN1P05114 RPL30P11-203ENST00000598995 310 ntBASIC0.72□□□□□ -2.29
HMGN1P05114 AP000860.1-201ENST00000605250 559 ntBASIC0.72□□□□□ -2.29
HMGN1P05114 BX284668.6-201ENST00000606899 438 ntBASIC0.72□□□□□ -2.29
HMGN1P05114 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.72□□□□□ -2.29
HMGN1P05114 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
HMGN1P05114 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
HMGN1P05114 DDX43P2-201ENST00000604753 1354 ntBASIC0.71□□□□□ -2.3
HMGN1P05114 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HMGN1P05114 RNU1-39P-201ENST00000383897 165 ntBASIC0.71□□□□□ -2.3
HMGN1P05114 RNU6-1065P-201ENST00000384513 106 ntBASIC0.71□□□□□ -2.3
HMGN1P05114 SNORD116-23-201ENST00000384645 92 ntBASIC0.71□□□□□ -2.3
HMGN1P05114 MIR506-201ENST00000384998 124 ntBASIC0.71□□□□□ -2.3
HMGN1P05114 AL592310.1-201ENST00000414330 671 ntBASIC0.71□□□□□ -2.3
HMGN1P05114 AC009518.2-201ENST00000418056 731 ntBASIC0.71□□□□□ -2.3
HMGN1P05114 EIF1P1-201ENST00000421436 341 ntBASIC0.71□□□□□ -2.3
HMGN1P05114 JTBP1-201ENST00000441314 247 ntBASIC0.71□□□□□ -2.3
HMGN1P05114 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.71□□□□□ -2.3
HMGN1P05114 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.71□□□□□ -2.3
HMGN1P05114 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.71□□□□□ -2.3
HMGN1P05114 SNORA31.16-201ENST00000516773 139 ntBASIC0.71□□□□□ -2.3
HMGN1P05114 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.71□□□□□ -2.3
HMGN1P05114 CBX3P8-201ENST00000532412 525 ntBASIC0.71□□□□□ -2.3
HMGN1P05114 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.71□□□□□ -2.3
HMGN1P05114 AL731537.2-201ENST00000561565 951 ntBASIC0.71□□□□□ -2.3
HMGN1P05114 AP005136.1-201ENST00000579765 429 ntBASIC0.71□□□□□ -2.3
HMGN1P05114 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.71□□□□□ -2.3
HMGN1P05114 AL022345.2-201ENST00000606307 135 ntBASIC0.71□□□□□ -2.3
HMGN1P05114 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.71□□□□□ -2.3
HMGN1P05114 AC091895.1-201ENST00000624494 256 ntBASIC0.71□□□□□ -2.3
HMGN1P05114 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HMGN1P05114 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
HMGN1P05114 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
HMGN1P05114 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
HMGN1P05114 RNU6-546P-201ENST00000383991 107 ntBASIC0.7□□□□□ -2.3
HMGN1P05114 RNU11-5P-201ENST00000391216 129 ntBASIC0.7□□□□□ -2.3
HMGN1P05114 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.7□□□□□ -2.3
HMGN1P05114 RPL31P3-201ENST00000458430 332 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms