Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 RNU6-166P-201ENST00000384371 107 ntBASIC2.25□□□□□ -2.05
MBD3O95983 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.25□□□□□ -2.05
MBD3O95983 HMGN2P19-201ENST00000425149 265 ntBASIC2.25□□□□□ -2.05
MBD3O95983 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.25□□□□□ -2.05
MBD3O95983 Z98742.2-201ENST00000431564 187 ntBASIC2.25□□□□□ -2.05
MBD3O95983 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.25□□□□□ -2.05
MBD3O95983 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.25□□□□□ -2.05
MBD3O95983 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.25□□□□□ -2.05
MBD3O95983 HIGD1AP2-201ENST00000446367 280 ntBASIC2.25□□□□□ -2.05
MBD3O95983 BTF3P15-201ENST00000455606 336 ntBASIC2.25□□□□□ -2.05
MBD3O95983 AP001324.2-201ENST00000461163 319 ntBASIC2.25□□□□□ -2.05
MBD3O95983 KLF3P2-201ENST00000465138 268 ntBASIC2.25□□□□□ -2.05
MBD3O95983 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
MBD3O95983 AC096576.1-201ENST00000489014 359 ntBASIC2.25□□□□□ -2.05
MBD3O95983 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.25□□□□□ -2.05
MBD3O95983 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.25□□□□□ -2.05
MBD3O95983 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.25□□□□□ -2.05
MBD3O95983 OR5AQ1P-201ENST00000527596 927 ntBASIC2.25□□□□□ -2.05
MBD3O95983 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
MBD3O95983 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
MBD3O95983 AC079598.5-201ENST00000547460 117 ntBASIC2.25□□□□□ -2.05
MBD3O95983 EIF4BP1-201ENST00000554881 351 ntBASIC2.25□□□□□ -2.05
MBD3O95983 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.25□□□□□ -2.05
MBD3O95983 AC009127.3-201ENST00000570531 403 ntBASIC2.25□□□□□ -2.05
MBD3O95983 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
MBD3O95983 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.25□□□□□ -2.05
MBD3O95983 AC093424.1-201ENST00000604999 338 ntBASIC2.25□□□□□ -2.05
MBD3O95983 MIR15A-201ENST00000607334 83 ntBASIC2.25□□□□□ -2.05
MBD3O95983 AL451064.1-201ENST00000607718 471 ntBASIC2.25□□□□□ -2.05
MBD3O95983 AC130324.3-201ENST00000614165 542 ntBASIC2.25□□□□□ -2.05
MBD3O95983 AL359547.2-201ENST00000615810 418 ntBASIC2.25□□□□□ -2.05
MBD3O95983 U4atac.1-201ENST00000618345 95 ntBASIC2.25□□□□□ -2.05
MBD3O95983 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.25□□□□□ -2.05
MBD3O95983 ZNF658B-202ENST00000615961 3375 ntBASIC2.24□□□□□ -2.05
MBD3O95983 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
MBD3O95983 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
MBD3O95983 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
MBD3O95983 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
MBD3O95983 RPS4XP8-201ENST00000402039 771 ntBASIC2.24□□□□□ -2.05
MBD3O95983 RNU6-1025P-201ENST00000410629 104 ntBASIC2.24□□□□□ -2.05
MBD3O95983 RNU2-8P-201ENST00000410727 190 ntBASIC2.24□□□□□ -2.05
MBD3O95983 AC097463.2-201ENST00000421074 142 ntBASIC2.24□□□□□ -2.05
MBD3O95983 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.24□□□□□ -2.05
MBD3O95983 RPL23AP30-201ENST00000432419 501 ntBASIC2.24□□□□□ -2.05
MBD3O95983 RPS15AP9-201ENST00000439856 381 ntBASIC2.24□□□□□ -2.05
MBD3O95983 NDUFB1P2-201ENST00000449477 176 ntBASIC2.24□□□□□ -2.05
MBD3O95983 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.24□□□□□ -2.05
MBD3O95983 SNRPFP4-201ENST00000456366 242 ntBASIC2.24□□□□□ -2.05
MBD3O95983 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.24□□□□□ -2.05
MBD3O95983 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.24□□□□□ -2.05
MBD3O95983 AC010587.1-201ENST00000505809 469 ntBASIC2.24□□□□□ -2.05
MBD3O95983 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.24□□□□□ -2.05
MBD3O95983 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.24□□□□□ -2.05
MBD3O95983 AL133241.1-201ENST00000556832 487 ntBASIC2.24□□□□□ -2.05
MBD3O95983 AC026464.5-201ENST00000562497 722 ntBASIC2.24□□□□□ -2.05
MBD3O95983 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.24□□□□□ -2.05
MBD3O95983 MIR4760-201ENST00000585040 80 ntBASIC2.24□□□□□ -2.05
MBD3O95983 AC112191.3-201ENST00000604371 277 ntBASIC2.24□□□□□ -2.05
MBD3O95983 AC018638.7-201ENST00000605836 1114 ntBASIC2.24□□□□□ -2.05
MBD3O95983 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.24□□□□□ -2.05
MBD3O95983 AC027807.2-201ENST00000616099 408 ntBASIC2.24□□□□□ -2.05
MBD3O95983 AP003485.2-201ENST00000623636 610 ntBASIC2.24□□□□□ -2.05
MBD3O95983 AC079248.2-201ENST00000623779 326 ntBASIC2.24□□□□□ -2.05
MBD3O95983 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.24□□□□□ -2.05
MBD3O95983 AC025048.6-202ENST00000627667 438 ntBASIC2.24□□□□□ -2.05
MBD3O95983 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.24□□□□□ -2.05
MBD3O95983 AC103710.2-202ENST00000641454 2853 ntBASIC2.23□□□□□ -2.05
MBD3O95983 AC138393.1-203ENST00000327086 343 ntBASIC2.23□□□□□ -2.05
MBD3O95983 RNA5SP289-201ENST00000362332 137 ntBASIC2.23□□□□□ -2.05
MBD3O95983 SNORA5B-201ENST00000363786 132 ntBASIC2.23□□□□□ -2.05
MBD3O95983 RNU1-91P-201ENST00000364746 163 ntBASIC2.23□□□□□ -2.05
MBD3O95983 RNA5SP125-201ENST00000364843 120 ntBASIC2.23□□□□□ -2.05
MBD3O95983 MIR1302-8-201ENST00000408342 128 ntBASIC2.23□□□□□ -2.05
MBD3O95983 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.23□□□□□ -2.05
MBD3O95983 AC119618.1-201ENST00000434191 222 ntBASIC2.23□□□□□ -2.05
MBD3O95983 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.23□□□□□ -2.05
MBD3O95983 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.23□□□□□ -2.05
MBD3O95983 USP9YP12-201ENST00000450481 570 ntBASIC2.23□□□□□ -2.05
MBD3O95983 RPL7P43-201ENST00000478876 753 ntBASIC2.23□□□□□ -2.05
MBD3O95983 RPS3AP22-201ENST00000488297 769 ntBASIC2.23□□□□□ -2.05
MBD3O95983 AC022493.1-201ENST00000492984 337 ntBASIC2.23□□□□□ -2.05
MBD3O95983 AF131216.2-201ENST00000512316 564 ntBASIC2.23□□□□□ -2.05
MBD3O95983 Y_RNA.689-201ENST00000516589 107 ntBASIC2.23□□□□□ -2.05
MBD3O95983 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.23□□□□□ -2.05
MBD3O95983 AC012213.3-201ENST00000577199 777 ntBASIC2.23□□□□□ -2.05
MBD3O95983 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.23□□□□□ -2.05
MBD3O95983 AL670379.10-201ENST00000604330 253 ntBASIC2.23□□□□□ -2.05
MBD3O95983 AL670379.9-201ENST00000605428 253 ntBASIC2.23□□□□□ -2.05
MBD3O95983 AC017037.3-201ENST00000625016 472 ntBASIC2.23□□□□□ -2.05
MBD3O95983 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.23□□□□□ -2.05
MBD3O95983 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
MBD3O95983 RNU6-898P-201ENST00000365627 104 ntBASIC2.22□□□□□ -2.05
MBD3O95983 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.22□□□□□ -2.05
MBD3O95983 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.22□□□□□ -2.05
MBD3O95983 NPM1P11-201ENST00000417106 855 ntBASIC2.22□□□□□ -2.05
MBD3O95983 EIF4EP4-201ENST00000424916 578 ntBASIC2.22□□□□□ -2.05
MBD3O95983 AL589872.1-201ENST00000426602 288 ntBASIC2.22□□□□□ -2.05
MBD3O95983 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.22□□□□□ -2.05
MBD3O95983 AC093106.2-201ENST00000428212 385 ntBASIC2.22□□□□□ -2.05
MBD3O95983 MED13P1-201ENST00000428342 171 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms