Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VAMP4O75379 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
VAMP4O75379 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
VAMP4O75379 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
VAMP4O75379 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
VAMP4O75379 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VAMP4O75379 AC138393.1-203ENST00000327086 343 ntBASIC4.39□□□□□ -1.71
VAMP4O75379 Y_RNA.80-201ENST00000362996 102 ntBASIC4.39□□□□□ -1.71
VAMP4O75379 Y_RNA.364-201ENST00000365532 101 ntBASIC4.39□□□□□ -1.71
VAMP4O75379 MIR568-201ENST00000385036 95 ntBASIC4.39□□□□□ -1.71
VAMP4O75379 MIR607-201ENST00000385241 96 ntBASIC4.39□□□□□ -1.71
VAMP4O75379 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.39□□□□□ -1.71
VAMP4O75379 AC008267.5-201ENST00000424928 265 ntBASIC4.39□□□□□ -1.71
VAMP4O75379 AL158071.1-201ENST00000430315 461 ntBASIC4.39□□□□□ -1.71
VAMP4O75379 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.39□□□□□ -1.71
VAMP4O75379 AC015911.1-201ENST00000495111 156 ntBASIC4.39□□□□□ -1.71
VAMP4O75379 RNU6-699P-201ENST00000517081 110 ntBASIC4.39□□□□□ -1.71
VAMP4O75379 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.39□□□□□ -1.71
VAMP4O75379 AC004817.2-201ENST00000561794 651 ntBASIC4.39□□□□□ -1.71
VAMP4O75379 ZNF192P1-203ENST00000565888 810 ntBASIC4.39□□□□□ -1.71
VAMP4O75379 MIR1273C-201ENST00000578669 77 ntBASIC4.39□□□□□ -1.71
VAMP4O75379 MIR4503-201ENST00000582187 83 ntBASIC4.39□□□□□ -1.71
VAMP4O75379 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.39□□□□□ -1.71
VAMP4O75379 AC107294.1-201ENST00000609524 467 ntBASIC4.39□□□□□ -1.71
VAMP4O75379 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP4O75379 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP4O75379 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP4O75379 AL513302.2-201ENST00000562313 1842 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 RNU1-33P-201ENST00000364249 162 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 RNU1-115P-201ENST00000365329 160 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 Y_RNA.473-201ENST00000384333 102 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 MIR301A-201ENST00000385261 86 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 RNU2-3P-201ENST00000410144 191 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 CYCSP33-201ENST00000414485 327 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.38□□□□□ -1.71
VAMP4O75379 UBE2D3P2-201ENST00000424409 445 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 MTCYBP10-201ENST00000424905 650 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 YME1L1P1-201ENST00000429435 297 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.38□□□□□ -1.71
VAMP4O75379 AC108860.1-201ENST00000484521 383 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 SUMO2P6-201ENST00000505273 288 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 MLLT10P2-201ENST00000506434 249 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 AC116655.1-201ENST00000508324 901 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.38□□□□□ -1.71
VAMP4O75379 SNORA70.19-201ENST00000516717 90 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 MIR2276-201ENST00000516886 89 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 RNU6-143P-201ENST00000516942 93 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP4O75379 AP004371.1-201ENST00000525240 214 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.38□□□□□ -1.71
VAMP4O75379 AC005476.1-201ENST00000554427 397 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.38□□□□□ -1.71
VAMP4O75379 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.38□□□□□ -1.71
VAMP4O75379 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP4O75379 BNIP3P16-201ENST00000589779 534 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 AC006006.1-201ENST00000603082 144 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 ELOCP5-201ENST00000604924 333 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 AC110741.2-201ENST00000605278 268 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 RNU6-85P-201ENST00000605989 107 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 AC006157.1-201ENST00000611750 366 ntBASIC4.38□□□□□ -1.71
VAMP4O75379 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP4O75379 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP4O75379 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP4O75379 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP4O75379 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.38□□□□□ -1.71
VAMP4O75379 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VAMP4O75379 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP4O75379 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.37□□□□□ -1.71
VAMP4O75379 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.37□□□□□ -1.71
VAMP4O75379 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP4O75379 RNA5SP197-201ENST00000363357 119 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 RNA5SP50-201ENST00000363731 107 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 SNORA7.2-201ENST00000364446 145 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 Y_RNA.401-201ENST00000383965 117 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 Y_RNA.496-201ENST00000384444 101 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 RNU6-331P-201ENST00000384724 107 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 MIR514A1-201ENST00000385133 98 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP4O75379 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.37□□□□□ -1.71
VAMP4O75379 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.37□□□□□ -1.71
VAMP4O75379 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.37□□□□□ -1.71
VAMP4O75379 AC079780.1-201ENST00000428259 207 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.37□□□□□ -1.71
VAMP4O75379 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.37□□□□□ -1.71
VAMP4O75379 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.37□□□□□ -1.71
VAMP4O75379 RPS24P13-201ENST00000442520 397 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.37□□□□□ -1.71
VAMP4O75379 HMGB1P30-201ENST00000492455 606 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.37□□□□□ -1.71
VAMP4O75379 Y_RNA.661-201ENST00000516003 99 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 SNORA31.20-201ENST00000517111 133 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 COX6CP5-201ENST00000527162 228 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.37□□□□□ -1.71
VAMP4O75379 NUTF2P8-201ENST00000604593 363 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VAMP4O75379 MIR92B-201ENST00000607575 96 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 AC069200.1-201ENST00000609511 323 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 AL162373.1-201ENST00000620433 407 ntBASIC4.37□□□□□ -1.71
VAMP4O75379 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms