Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 AL137003.2-201ENST00000606924 2538 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 Y_RNA.296-201ENST00000364930 108 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 RNU6-750P-201ENST00000390946 107 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 MRPL42P2-201ENST00000403169 426 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 RNU4-55P-201ENST00000410731 137 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 AC023141.4-201ENST00000412031 328 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 AC092809.3-201ENST00000415453 231 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 HMGB1P9-201ENST00000429856 646 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 OSTCP8-201ENST00000445117 448 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 RNU7-59P-201ENST00000459101 61 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 RN7SL429P-201ENST00000479090 223 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 RN7SL489P-201ENST00000486185 223 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 RN7SL327P-201ENST00000488659 223 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 AL359212.1-201ENST00000556608 614 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 AC025449.1-201ENST00000603896 529 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 AP001596.2-201ENST00000608410 312 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 AC046143.2-201ENST00000609789 160 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 AC104237.2-201ENST00000612456 443 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 RN7SL853P-201ENST00000617250 223 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 AL359740.1-201ENST00000624340 592 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 MIR1291-201ENST00000627649 87 ntBASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TRIM49BA6NDI0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 SNORD56.2-201ENST00000363242 71 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 U3.12-201ENST00000364498 214 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 SMIM11P1-201ENST00000369586 178 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 RNU6-701P-201ENST00000384059 107 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 RNU6-301P-201ENST00000384277 107 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 RNU6-606P-201ENST00000384721 111 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 AL359634.1-202ENST00000404721 284 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 GSTA9P-201ENST00000406231 611 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 AC114491.1-201ENST00000416095 246 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 ISCA1P1-201ENST00000426679 387 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 ELOCP14-201ENST00000428070 331 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 AC133104.1-201ENST00000429100 218 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 ELOCP7-201ENST00000439968 331 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 AC020550.1-201ENST00000447385 163 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 RPS29P20-201ENST00000489592 171 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 AC107401.1-201ENST00000503426 685 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 AC008716.1-201ENST00000511084 513 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 RNU6-506P-201ENST00000516553 94 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 RPL7P20-201ENST00000520308 745 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 AC004805.2-201ENST00000605382 482 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 AC007684.1-201ENST00000609671 477 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 AC016717.2-201ENST00000609089 5141 ntBASIC2.59□□□□□ -1.99
TRIM49BA6NDI0 Z82195.2-201ENST00000612348 18351 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.58□□□□□ -2
TRIM49BA6NDI0 AC110491.1-201ENST00000562191 2010 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRIM49BA6NDI0 OR4G2P-201ENST00000328113 903 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 Y_RNA.367-201ENST00000365544 101 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 RNU5A-6P-201ENST00000384136 116 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 RNU6-456P-201ENST00000384493 107 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM49BA6NDI0 AL591416.1-201ENST00000404015 867 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.58□□□□□ -2
TRIM49BA6NDI0 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49BA6NDI0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49BA6NDI0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49BA6NDI0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.58□□□□□ -2
TRIM49BA6NDI0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.58□□□□□ -2
TRIM49BA6NDI0 MTATP6P16-201ENST00000434543 526 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 RPS15AP28-201ENST00000435088 386 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 AC132479.1-201ENST00000449160 144 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 AL121769.1-201ENST00000469473 401 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 AC126389.1-201ENST00000477436 290 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 RPL23AP41-201ENST00000484754 458 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.58□□□□□ -2
TRIM49BA6NDI0 AF213884.2-201ENST00000510417 903 ntBASIC2.58□□□□□ -2
TRIM49BA6NDI0 AC011352.1-201ENST00000512300 793 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms