Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 RNU6-1179P-201ENST00000384667 107 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 Z85995.1-201ENST00000415547 335 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 AL353621.1-201ENST00000418219 243 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 MTND2P23-201ENST00000422990 651 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 AL590632.1-201ENST00000424289 371 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 Z82205.1-201ENST00000428456 297 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 AL590383.1-201ENST00000428602 75 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 GPM6BP2-201ENST00000432046 144 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 GPM6BP1-201ENST00000446387 144 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU6-327P-201ENST00000516270 127 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU6-1045P-201ENST00000516321 107 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 SNORA70.16-201ENST00000516390 95 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU6-1016P-201ENST00000516689 94 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 AC068657.1-201ENST00000520807 306 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 AL157871.3-201ENST00000557231 293 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 AC006270.2-201ENST00000578523 652 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 MIR4644-201ENST00000579929 84 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 LRRC37A5P-203ENST00000580181 585 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 AC006504.6-201ENST00000590142 199 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 AL360085.1-201ENST00000604713 532 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 MIR7112-201ENST00000616126 65 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 PISRT1.1-201ENST00000616930 107 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 AC244517.12-201ENST00000623581 663 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 MIR7153-201ENST00000637758 57 ntBASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TCRBV5S1A1TA0A578 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 AC138393.1-203ENST00000327086 343 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 MIR148B-201ENST00000362252 99 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 Y_RNA.33-201ENST00000362591 102 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 SNORD3E-201ENST00000362899 217 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 Y_RNA.245-201ENST00000364493 95 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU6-95P-201ENST00000384697 107 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 SNORA75.4-201ENST00000391278 119 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU6-293P-201ENST00000411259 106 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 AL158156.1-201ENST00000422509 473 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 UBE2V1P4-201ENST00000425374 344 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 AL645568.3-201ENST00000433683 316 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 AP000873.1-201ENST00000463987 400 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 AL163540.1-201ENST00000485382 386 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 AC022493.1-201ENST00000492984 337 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 AC110794.1-201ENST00000505816 425 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 AC005921.1-201ENST00000510589 286 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 RNA5SP291-201ENST00000517222 105 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 NUTF2P8-201ENST00000604593 363 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 AC090132.2-201ENST00000615881 347 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 AL669831.3-213ENST00000636676 183 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 AC008568.2-201ENST00000623862 2313 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 AC005183.1-201ENST00000603687 1979 ntBASIC3.31□□□□□ -1.88
TCRBV5S1A1TA0A578 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 AC116096.1-201ENST00000566804 2314 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 SNORD62.1-201ENST00000362541 86 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU6-310P-201ENST00000384655 107 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 MIR606-201ENST00000384851 96 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 MIR607-201ENST00000385241 96 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 RNU6-328P-201ENST00000390887 106 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 AC007919.1-201ENST00000429380 217 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 HIGD1AP11-201ENST00000438361 280 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 MTCO3P10-201ENST00000455912 772 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 S100A11P1-201ENST00000477525 312 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 AC109925.1-201ENST00000478069 331 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 RPL31P13-201ENST00000484151 370 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 AC092436.3-201ENST00000511788 257 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 AC023141.12-201ENST00000512399 199 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 Y_RNA.708-201ENST00000516950 96 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 Y_RNA.711-201ENST00000516993 102 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 RNA5SP290-201ENST00000517133 127 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 SNRPGP18-201ENST00000553000 214 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 TRAV37-201ENST00000553906 342 ntBASIC3.3□□□□□ -1.88
TCRBV5S1A1TA0A578 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms