Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AC116562.3-201ENST00000506136 177 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AC023141.11-201ENST00000508864 202 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 SNORA70.24-201ENST00000517233 118 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 MTCYBP20-201ENST00000524239 1129 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AP001646.1-201ENST00000527936 915 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AC068587.5-201ENST00000528506 175 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 PRELID2P1-201ENST00000552837 301 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AC234778.2-201ENST00000566241 354 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AC106782.4-201ENST00000568264 210 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 MIR548AC-201ENST00000585049 88 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 MIR6798-201ENST00000612887 67 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AC010678.1-201ENST00000614118 713 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AC025034.2-201ENST00000623264 286 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AL160394.1-201ENST00000624765 724 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 MIR1291-201ENST00000627649 87 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 MIR3974-201ENST00000637126 96 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 ZNF720P1-201ENST00000562403 1939 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AL359854.1-201ENST00000614203 1594 ntBASIC1.93□□□□□ -2.1
CCL28Q9NRJ3 AL109809.4-201ENST00000603520 2185 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 MIR412-201ENST00000362142 91 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 MIR208A-201ENST00000362287 71 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 Y_RNA.201-201ENST00000364052 96 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 Y_RNA.367-201ENST00000365544 101 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 SNORA80E-201ENST00000384744 137 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 MIR196B-201ENST00000384852 84 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 RNU6-220P-201ENST00000390919 107 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 Y_RNA.623-201ENST00000411128 95 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AL031779.1-201ENST00000415663 330 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AC009518.2-201ENST00000418056 731 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 C1DP2-201ENST00000418167 426 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AC063976.3-201ENST00000426849 329 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 GPR143P-201ENST00000434155 205 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 FABP5P14-201ENST00000437273 393 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AC004383.1-201ENST00000438135 289 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AL441985.1-201ENST00000457727 251 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AC090096.1-201ENST00000489168 390 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AC022493.1-201ENST00000492984 337 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 MTND4P2-201ENST00000507767 1203 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 RBBP4P6-201ENST00000508098 202 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AC010486.3-201ENST00000511602 785 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AC112206.3-201ENST00000514578 389 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 SCARNA3-201ENST00000517097 143 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AC109329.2-201ENST00000519658 482 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 RANP3-201ENST00000530970 276 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AC021269.2-201ENST00000532318 330 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 MIR4765-201ENST00000585007 77 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AC008521.1-201ENST00000587471 187 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AC098848.2-201ENST00000588023 330 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 DEFB131E-202ENST00000602581 683 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AC245014.2-201ENST00000603689 287 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AC246785.4-201ENST00000605374 287 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AL021997.1-201ENST00000605757 193 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 MIR98-201ENST00000606724 119 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AL158063.1-201ENST00000615349 536 ntBASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.92□□□□□ -2.1
CCL28Q9NRJ3 AC093536.2-201ENST00000565257 1406 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 CKAP2P1-201ENST00000555477 2049 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 SNORD3E-201ENST00000362899 217 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 RNU6-108P-201ENST00000365558 107 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 UBE2V1P2-201ENST00000397758 440 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 HMGN2P35-201ENST00000412164 270 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 AC090960.1-201ENST00000421072 306 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 AL365338.1-201ENST00000422282 858 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 RPL30P4-201ENST00000429309 333 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 AL627311.1-201ENST00000431514 115 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 RPS15AP28-201ENST00000435088 386 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 AC025750.2-201ENST00000442609 450 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 AC244505.5-201ENST00000443639 207 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms