Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 MIR186-201ENST00000384988 86 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 SNORA40.4-201ENST00000390971 128 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 RNA5SP212-201ENST00000391223 107 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 CISD1P1-201ENST00000393907 327 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 RNU4-22P-201ENST00000411058 166 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 PIGPP2-201ENST00000411569 458 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 MTATP6P20-201ENST00000414147 562 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 AC009963.1-201ENST00000417265 157 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 AC138623.1-201ENST00000418060 216 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 AL591704.1-201ENST00000432574 275 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 AC007182.2-201ENST00000489251 402 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 RPL23AP63-201ENST00000498752 471 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 RNU2-53P-201ENST00000516257 147 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 RNU6-914P-201ENST00000516749 109 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 AC013828.2-201ENST00000532487 235 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 AC074050.1-201ENST00000563247 211 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 MIR5195-201ENST00000583555 115 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 AC073410.2-201ENST00000603240 332 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 AP001981.2-201ENST00000603241 418 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 AC022893.3-201ENST00000607665 437 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 AL391813.2-201ENST00000609113 322 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 AC092192.1-201ENST00000633154 1018 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 MIR219B-201ENST00000637023 88 ntBASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.57□□□□□ -2.16
VCX3AQ9NNX9 SNORA71.3-201ENST00000362582 128 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 SNORA4.1-201ENST00000364263 144 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 SNORA75B-201ENST00000384053 137 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 RNU2-36P-201ENST00000410361 191 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AC092809.3-201ENST00000415453 231 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AC074117.2-201ENST00000417130 397 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AL591212.2-201ENST00000433923 257 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AL357134.1-201ENST00000445848 426 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 FCF1P6-201ENST00000456841 595 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AC087884.1-201ENST00000469738 328 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 MED28P2-201ENST00000475771 317 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 FO393415.2-201ENST00000480085 343 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AP003392.2-201ENST00000527269 208 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AP000763.2-201ENST00000540641 163 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AC136618.2-201ENST00000575091 400 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 MIR4285-201ENST00000581001 85 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 MIR4713-201ENST00000582691 75 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 VN1R82P-201ENST00000601481 356 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AC080013.3-201ENST00000606839 578 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AC091965.4-201ENST00000607691 587 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 MIR7106-201ENST00000612419 65 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AL365204.3-201ENST00000612448 685 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AC108479.2-201ENST00000617314 601 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 AC099786.3-201ENST00000565735 1410 ntBASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
VCX3AQ9NNX9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 RNU6-1274P-201ENST00000384557 107 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 MIR597-201ENST00000384968 97 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 RNU2-32P-201ENST00000411193 191 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AL445646.1-201ENST00000431784 216 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 RPL7P36-201ENST00000444633 681 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AL139824.2-201ENST00000458731 1095 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AC097462.2-201ENST00000504623 481 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AC109927.2-201ENST00000506416 303 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AL157871.3-201ENST00000557231 293 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 MTCYBP33-201ENST00000575007 1130 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AL670379.6-201ENST00000603753 252 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AL670379.11-201ENST00000604059 253 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AC008162.1-201ENST00000604718 254 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AL670379.1-201ENST00000604752 252 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AL670379.5-201ENST00000605253 252 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AL670379.12-201ENST00000605291 253 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AL670379.8-201ENST00000605353 252 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AL670379.7-201ENST00000605823 252 ntBASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.55□□□□□ -2.16
VCX3AQ9NNX9 Z82243.1-201ENST00000609432 473 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms