Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AL391840.1-201ENST00000571144 367 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 AL355598.1-201ENST00000604169 202 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 AL022154.1-201ENST00000604698 785 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.71□□□□□ -1.98
SNX25Q9H3E2 UCA1.1-201ENST00000620952 75 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 AC010297.1-201ENST00000623948 149 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.71□□□□□ -1.98
SNX25Q9H3E2 AL157786.1-207ENST00000627771 695 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 AC138915.1-201ENST00000565427 1685 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
SNX25Q9H3E2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.71□□□□□ -1.98
SNX25Q9H3E2 MTND5P17-201ENST00000418405 1603 ntBASIC2.71□□□□□ -1.98
SNX25Q9H3E2 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SNX25Q9H3E2 SNORD115-7-201ENST00000365306 82 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.7□□□□□ -1.98
SNX25Q9H3E2 Y_RNA.576-201ENST00000384781 102 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 OR51A5P-201ENST00000415429 942 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 AL160275.3-201ENST00000423876 471 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.7□□□□□ -1.98
SNX25Q9H3E2 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.7□□□□□ -1.98
SNX25Q9H3E2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.7□□□□□ -1.98
SNX25Q9H3E2 RPS3P1-201ENST00000456781 192 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 AC026801.1-201ENST00000497178 464 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 SEM1P1-201ENST00000506694 209 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 AC113155.1-201ENST00000511141 769 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 RNA5SP320-201ENST00000516263 124 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 RNU6-685P-201ENST00000517088 95 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.7□□□□□ -1.98
SNX25Q9H3E2 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.7□□□□□ -1.98
SNX25Q9H3E2 AL157871.3-201ENST00000557231 293 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 MIR4775-201ENST00000581168 75 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.7□□□□□ -1.98
SNX25Q9H3E2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.7□□□□□ -1.98
SNX25Q9H3E2 AC010620.2-201ENST00000600135 313 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 AL355877.2-201ENST00000603670 358 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.7□□□□□ -1.98
SNX25Q9H3E2 AP001486.3-201ENST00000615334 372 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 U4.3-201ENST00000621047 82 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 AC092656.1-203ENST00000624134 423 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SNX25Q9H3E2 AL355596.1-201ENST00000565399 3996 ntBASIC2.7□□□□□ -1.98
SNX25Q9H3E2 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SNX25Q9H3E2 ZNF519P1-201ENST00000449011 1626 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 RNU6-179P-201ENST00000363350 107 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.69□□□□□ -1.98
SNX25Q9H3E2 RNU6-750P-201ENST00000390946 107 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 SNORA40C-201ENST00000391285 128 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 CISD1P1-201ENST00000393907 327 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 FO393413.1-201ENST00000402892 195 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.69□□□□□ -1.98
SNX25Q9H3E2 RNU6-1025P-201ENST00000410629 104 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 RNU6-193P-201ENST00000410977 107 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.69□□□□□ -1.98
SNX25Q9H3E2 AC016907.1-201ENST00000419483 435 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 AL365338.1-201ENST00000422282 858 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 MTCYBP5-201ENST00000423752 1135 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 AC098614.2-201ENST00000426040 255 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.69□□□□□ -1.98
SNX25Q9H3E2 USP9YP14-201ENST00000430663 563 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 AC009296.1-201ENST00000443146 155 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 RPS15AP27-201ENST00000449183 343 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.69□□□□□ -1.98
SNX25Q9H3E2 AC107626.1-201ENST00000471084 183 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 TRBV1-201ENST00000476502 284 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 AC022493.1-201ENST00000492984 337 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.69□□□□□ -1.98
SNX25Q9H3E2 RN7SKP298-201ENST00000515950 94 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 RNU6-572P-201ENST00000516724 80 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 RPL7P20-201ENST00000520308 745 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.69□□□□□ -1.98
SNX25Q9H3E2 AC024909.2-201ENST00000553035 286 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
SNX25Q9H3E2 MTND1P15-201ENST00000579262 949 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.69□□□□□ -1.98
SNX25Q9H3E2 MIR3670-2-201ENST00000582974 65 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 MIR5092-201ENST00000583139 88 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 MIR3670-1-201ENST00000584160 65 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 MIR3670-3-201ENST00000584855 65 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 AC068790.2-201ENST00000602601 557 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 Z84480.1-201ENST00000605131 311 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 MIR3670-4-201ENST00000612260 65 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 AC011155.2-201ENST00000623202 216 ntBASIC2.69□□□□□ -1.98
SNX25Q9H3E2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SNX25Q9H3E2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SNX25Q9H3E2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 CKAP2P1-201ENST00000555477 2049 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 Y_RNA.33-201ENST00000362591 102 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 Y_RNA.159-201ENST00000363674 87 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 RNU6-456P-201ENST00000384493 107 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 MIR454-201ENST00000390180 115 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 Y_RNA.582-201ENST00000391023 95 ntBASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.68□□□□□ -1.98
SNX25Q9H3E2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms