Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC010587.1-201ENST00000505809 469 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC114797.1-201ENST00000514003 728 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 RNU6-991P-201ENST00000516168 107 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 Y_RNA.672-201ENST00000516289 104 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 RNA5SP200-201ENST00000516360 103 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 SCARNA16.3-201ENST00000516595 184 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 ATP5F1P5-201ENST00000526403 760 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 GLYCAM1-201ENST00000546596 285 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC137800.2-201ENST00000574375 120 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 MIR3167-201ENST00000579623 85 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 LRRC37A5P-203ENST00000580181 585 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 MIR4293-201ENST00000584305 78 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC091805.2-201ENST00000603848 235 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AP000860.1-201ENST00000605250 559 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AL139286.2-201ENST00000606838 396 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC007038.2-201ENST00000608095 740 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC103710.2-201ENST00000609912 942 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 MIR6840-201ENST00000611937 71 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC091834.1-201ENST00000614543 472 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC009268.2-201ENST00000621925 457 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC027309.3-201ENST00000623419 351 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC019226.1-201ENST00000625666 515 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 AC110994.2-201ENST00000635481 492 ntBASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RSPO3Q9BXY4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.96□□□□□ -2.09
RSPO3Q9BXY4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AL596028.1-201ENST00000326971 197 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 RNY3P13-201ENST00000365542 102 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 RNU1-39P-201ENST00000383897 165 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 RNU1-73P-201ENST00000383971 164 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 MTND1P21-201ENST00000412991 285 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 MTCO3P30-201ENST00000426425 670 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 SRIP2-201ENST00000428470 166 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 MTATP6P30-201ENST00000443540 664 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AC079448.1-201ENST00000449377 373 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 MTND1P27-201ENST00000451117 902 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 RNU6-717P-201ENST00000459076 104 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 snoU109.1-201ENST00000459339 135 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AC092436.1-201ENST00000506450 503 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 RNA5SP337-201ENST00000517007 109 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 RNU6-64P-201ENST00000517119 105 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AP003033.1-201ENST00000527244 415 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AC005951.2-201ENST00000576282 495 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AL136363.2-201ENST00000604173 851 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AL359999.1-201ENST00000604513 294 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AL022154.1-201ENST00000604698 785 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 NDUFA8P1-201ENST00000605525 367 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AC004492.1-201ENST00000607036 742 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AC004067.1-201ENST00000608733 700 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 TUG1_2.1-201ENST00000614234 87 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AC108479.2-201ENST00000617314 601 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 MIR6130-201ENST00000619419 109 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 AC136475.10-201ENST00000620253 385 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 PISRT1-201ENST00000626175 531 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RSPO3Q9BXY4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 Y_RNA.3-201ENST00000362331 103 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 RNU5A-8P-201ENST00000364102 114 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 RNU6-169P-201ENST00000365336 107 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 RNU6-282P-201ENST00000365357 103 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 RNU6-76P-201ENST00000384060 104 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 C1DP2-201ENST00000418167 426 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms