Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 BCRP9-201ENST00000605312 388 ntBASIC1.91□□□□□ -2.1
BPIFA3Q9BQP9 AL355472.4-201ENST00000610233 626 ntBASIC1.91□□□□□ -2.1
BPIFA3Q9BQP9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.91□□□□□ -2.1
BPIFA3Q9BQP9 AL590808.1-201ENST00000618696 141 ntBASIC1.91□□□□□ -2.1
BPIFA3Q9BQP9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.91□□□□□ -2.1
BPIFA3Q9BQP9 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.9□□□□□ -2.1
BPIFA3Q9BQP9 RNU5E-1-201ENST00000362477 120 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 AL079342.1-201ENST00000401460 267 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 AL645568.3-201ENST00000433683 316 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 KATNBL1P6-201ENST00000453433 915 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 UBE2DNL-203ENST00000474922 222 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 RNA5SP182-201ENST00000516064 82 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 RNU6-678P-201ENST00000516832 109 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 AC034114.1-201ENST00000520293 285 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 AP004247.1-201ENST00000531556 1289 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 AC233702.2-202ENST00000562547 291 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 VN1R82P-201ENST00000601481 356 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 AC174048.1-201ENST00000603389 144 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 AL713866.2-201ENST00000603579 219 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 AC007363.1-201ENST00000604736 620 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 AC097478.2-201ENST00000610572 514 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 AL365204.3-201ENST00000612448 685 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 AC005296.1-201ENST00000616145 209 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 Z99571.1-201ENST00000636677 394 ntBASIC1.9□□□□□ -2.11
BPIFA3Q9BQP9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 RNU6-898P-201ENST00000365627 104 ntBASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 AC019129.1-201ENST00000403786 261 ntBASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 RNU2-62P-201ENST00000410868 191 ntBASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 RPL23AP39-201ENST00000415533 405 ntBASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 AL158823.1-201ENST00000418441 478 ntBASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 AL078601.1-201ENST00000444542 271 ntBASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 RPL7P36-201ENST00000444633 681 ntBASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 BZW1P2-201ENST00000473537 826 ntBASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 HMGB3P17-201ENST00000504195 649 ntBASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 AC091965.2-201ENST00000512324 613 ntBASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 NDUFA5P6-201ENST00000542110 379 ntBASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 AC110588.1-201ENST00000559699 137 ntBASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 AC107952.2-201ENST00000606048 486 ntBASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 AL356596.1-201ENST00000624230 379 ntBASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 MTND5P42-201ENST00000637720 498 ntBASIC1.89□□□□□ -2.11
BPIFA3Q9BQP9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 U3.13-201ENST00000364804 214 ntBASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 SNORA40C-201ENST00000391285 128 ntBASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 PIGPP2-201ENST00000411569 458 ntBASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 AL445685.2-201ENST00000422551 342 ntBASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 AC096920.1-201ENST00000423991 241 ntBASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 AL031313.1-201ENST00000448435 256 ntBASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 snoU109.1-201ENST00000459339 135 ntBASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 SNORA4.4-201ENST00000515921 135 ntBASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 SNORA31.19-201ENST00000517079 126 ntBASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 MTCYBP23-201ENST00000558717 1102 ntBASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 AC010928.2-201ENST00000588017 287 ntBASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 AP001981.2-201ENST00000603241 418 ntBASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 AC064859.1-201ENST00000624741 174 ntBASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 AL512643.1-201ENST00000635735 524 ntBASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 AC010149.2-201ENST00000637608 315 ntBASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.88□□□□□ -2.11
BPIFA3Q9BQP9 MIR449A-201ENST00000362113 91 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 SNORD114-19-201ENST00000363072 75 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 Y_RNA.534-201ENST00000384599 112 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 U8.14-201ENST00000390843 143 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 RNA5SP508-201ENST00000411327 119 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 ELOCP17-201ENST00000414751 326 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 ELOCP9-201ENST00000418624 239 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 MTCO2P20-201ENST00000437339 673 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 RPL7P54-201ENST00000438336 674 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 MTND3P1-201ENST00000441336 220 ntBASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.87□□□□□ -2.11
BPIFA3Q9BQP9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms