Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.41□□□□□ -1.86
TIMP4Q99727 AC109446.1-201ENST00000566172 220 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 FAM60BP-201ENST00000578364 658 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 SNORD84-203ENST00000584275 78 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 MIR548AC-201ENST00000585049 88 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.41□□□□□ -1.86
TIMP4Q99727 SNORA51-201ENST00000606420 132 ntBASIC3.41□□□□□ -1.86
TIMP4Q99727 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TIMP4Q99727 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TIMP4Q99727 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TIMP4Q99727 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.4□□□□□ -1.86
TIMP4Q99727 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
TIMP4Q99727 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TIMP4Q99727 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.4□□□□□ -1.86
TIMP4Q99727 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TIMP4Q99727 AC073073.2-201ENST00000609827 2578 ntBASIC3.4□□□□□ -1.86
TIMP4Q99727 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TIMP4Q99727 Y_RNA.48-201ENST00000362710 103 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 RNU6-283P-201ENST00000364788 107 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 RNU6-702P-201ENST00000364982 107 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 SET-203ENST00000372688 801 ntTSL 2 BASIC3.4□□□□□ -1.87
TIMP4Q99727 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.4□□□□□ -1.87
TIMP4Q99727 SNORA5A-201ENST00000384111 134 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 RNU6-790P-201ENST00000384479 105 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 Y_RNA.534-201ENST00000384599 112 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 MIR449B-201ENST00000384995 97 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.4□□□□□ -1.87
TIMP4Q99727 RNU6-55P-201ENST00000411092 107 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 AL035423.1-201ENST00000420331 213 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 MRPS18CP6-201ENST00000423587 223 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 MTCO1P39-201ENST00000426148 480 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.4□□□□□ -1.87
TIMP4Q99727 AL731563.1-201ENST00000442202 214 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TIMP4Q99727 RPS29P31-201ENST00000446147 164 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 HSPE1P6-201ENST00000479457 291 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.4□□□□□ -1.87
TIMP4Q99727 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.4□□□□□ -1.87
TIMP4Q99727 SUMO2P6-201ENST00000505273 288 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 MLLT10P2-201ENST00000506434 249 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TIMP4Q99727 RAC1P2-201ENST00000511164 579 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 RNU6-307P-201ENST00000516743 106 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 RN7SKP209-201ENST00000516888 304 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 RNU6-143P-201ENST00000516942 93 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 RNA5SP471-201ENST00000516971 106 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TIMP4Q99727 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.4□□□□□ -1.87
TIMP4Q99727 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
TIMP4Q99727 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.4□□□□□ -1.87
TIMP4Q99727 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.4□□□□□ -1.87
TIMP4Q99727 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.4□□□□□ -1.87
TIMP4Q99727 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.4□□□□□ -1.87
TIMP4Q99727 AC113195.1-201ENST00000579952 141 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.4□□□□□ -1.87
TIMP4Q99727 AC005899.2-201ENST00000584353 90 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 AC008739.3-201ENST00000603262 127 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 AC018889.1-201ENST00000605372 397 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 AC034102.8-201ENST00000615146 484 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.4□□□□□ -1.87
TIMP4Q99727 AL034408.1-202ENST00000636088 415 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.4□□□□□ -1.87
TIMP4Q99727 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TIMP4Q99727 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.4□□□□□ -1.87
TIMP4Q99727 OR4G2P-202ENST00000641004 1759 ntBASIC3.4□□□□□ -1.87
TIMP4Q99727 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
TIMP4Q99727 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.4□□□□□ -1.87
TIMP4Q99727 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TIMP4Q99727 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.39□□□□□ -1.87
TIMP4Q99727 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TIMP4Q99727 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TIMP4Q99727 Y_RNA.153-201ENST00000363615 91 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 SYF2P2-201ENST00000417620 583 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 AC114482.1-201ENST00000418010 247 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 RPS15AP6-201ENST00000420703 385 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 CBX3P6-201ENST00000430257 527 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 AL158071.1-201ENST00000430315 461 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 HSPD1P21-201ENST00000436541 245 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 AL358232.1-201ENST00000448030 501 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 HMGN2P7-201ENST00000456186 273 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 U8.20-201ENST00000459445 131 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 AC078918.1-201ENST00000498515 228 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 AC110794.1-201ENST00000505816 425 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.39□□□□□ -1.87
TIMP4Q99727 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.39□□□□□ -1.87
TIMP4Q99727 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.39□□□□□ -1.87
TIMP4Q99727 APOOP4-201ENST00000513530 597 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 AC007991.1-201ENST00000522680 631 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 MIR4738-201ENST00000579134 87 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 MIR4644-201ENST00000579929 84 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 AC002545.1-201ENST00000592511 181 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 SNORA62.6-201ENST00000606322 83 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 RNU1-30P-201ENST00000606575 163 ntBASIC3.39□□□□□ -1.87
TIMP4Q99727 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TIMP4Q99727 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.39□□□□□ -1.87
TIMP4Q99727 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.39□□□□□ -1.87
TIMP4Q99727 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TIMP4Q99727 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TIMP4Q99727 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms