Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL078601.1-201ENST00000444542 271 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 AL583843.1-201ENST00000456070 346 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 AL590639.1-201ENST00000456484 337 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 HMGN2P13-201ENST00000476476 274 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 RPL21P13-201ENST00000488305 481 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 AC079140.5-201ENST00000507882 310 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 HIGD1AP13-201ENST00000509878 289 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 AC104027.1-201ENST00000521887 300 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 TRAV37-201ENST00000553906 342 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 OR11H5P-201ENST00000554039 926 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 MIR4782-201ENST00000577987 79 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 MIR548S-201ENST00000581352 82 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 Z83843.1-201ENST00000604070 3685 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 RNA5SP374-201ENST00000362939 125 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 Y_RNA.160-201ENST00000363677 92 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 SNORA38.1-201ENST00000364172 131 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 Y_RNA.373-201ENST00000365600 103 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 Y_RNA.390-201ENST00000383932 102 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 RNU1-73P-201ENST00000383971 164 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 RNU6-198P-201ENST00000384258 104 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 Y_RNA.480-201ENST00000384364 102 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 MT-TL1-201ENST00000386347 75 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 SNORA40C-201ENST00000391285 128 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 AL162578.1-201ENST00000406202 378 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 NDUFS5P4-201ENST00000412983 318 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 TOMM20P4-201ENST00000427861 435 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 MYL8P-204ENST00000431574 518 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 RPL23AP22-201ENST00000437556 453 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 AL671855.1-201ENST00000446875 1203 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 AC092798.1-201ENST00000458542 409 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 AC007547.1-201ENST00000462177 490 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 DYNLL1P5-201ENST00000467158 270 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 AC128713.1-201ENST00000471495 306 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 MTND3P25-201ENST00000509243 135 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 RNA5SP217-201ENST00000515959 91 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 AL163153.1-201ENST00000554223 283 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 MTND4LP5-201ENST00000605152 292 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 AC099778.2-201ENST00000610904 211 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 AC093913.1-201ENST00000614178 329 ntBASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHMP4CQ96CF2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 Y_RNA.100-201ENST00000363141 102 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 RNU6-778P-201ENST00000363269 103 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 SNORA75B-201ENST00000384053 137 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 RNA5SP252-201ENST00000391131 119 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 AL356057.2-201ENST00000403318 432 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 Y_RNA.623-201ENST00000411128 95 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 CYCSP32-201ENST00000440548 321 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 AC125238.1-201ENST00000448842 249 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 MTND3P10-201ENST00000450967 341 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 MTATP6P7-201ENST00000453315 681 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 RPL21P93-201ENST00000480465 489 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 RPL7P20-201ENST00000520308 745 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 AP000763.2-201ENST00000540641 163 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 AL391261.3-201ENST00000557194 520 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 MTCO3P23-201ENST00000561363 289 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 MIR5680-201ENST00000577577 84 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 VN1R80P-201ENST00000597126 338 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 ATP1B3P1-201ENST00000605365 821 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 AC073657.2-201ENST00000605661 303 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 AL591516.1-201ENST00000611326 274 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 AL031601.2-202ENST00000622650 282 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 DUXAP9-208ENST00000622815 614 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 AP003122.6-201ENST00000623831 495 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 U2.21-201ENST00000637295 81 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 AC233263.6-201ENST00000631132 1963 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 AC093536.2-201ENST00000565257 1406 ntBASIC3.87□□□□□ -1.79
CHMP4CQ96CF2 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 SNORD3E-201ENST00000362899 217 ntBASIC3.86□□□□□ -1.79
CHMP4CQ96CF2 MIR483-201ENST00000385070 76 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms