Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 MTCO3P46-201ENST00000425787 232 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 AL360271.2-201ENST00000447710 161 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 HMGB3P22-202ENST00000451823 572 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 AC114781.4-201ENST00000513707 639 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 SNORA19.2-201ENST00000516013 114 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 RN7SKP256-201ENST00000517201 314 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 AC090115.3-201ENST00000553218 849 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 MTCO3P23-201ENST00000561363 289 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 AC005668.1-201ENST00000571142 476 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 ATP1B3P1-201ENST00000605365 821 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 AC008962.1-201ENST00000605729 304 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 AC009994.1-201ENST00000606889 253 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 DUSP12P1-201ENST00000612874 516 ntBASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM43Q96BQ3 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.59□□□□□ -1.84
TRIM43Q96BQ3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 Y_RNA.480-201ENST00000384364 102 ntBASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 OOSP1P1-201ENST00000423265 274 ntBASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 IFNA20P-201ENST00000436840 528 ntBASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 SNRPEP8-201ENST00000442866 260 ntBASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 RPL32P28-201ENST00000443577 397 ntBASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 RPL30P14-201ENST00000482744 348 ntBASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 AC006445.2-201ENST00000510061 472 ntBASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 TBCAP3-201ENST00000512475 312 ntBASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 RNU4-49P-201ENST00000516080 140 ntBASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 AP006245.1-201ENST00000522549 120 ntBASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 AC011602.1-201ENST00000546484 331 ntBASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 HMGB1P14-201ENST00000557424 591 ntBASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 UBL5P2-201ENST00000583788 219 ntBASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 AC073539.2-201ENST00000597113 165 ntBASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 AC092628.2-201ENST00000622492 339 ntBASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 AC099654.5-201ENST00000636479 350 ntBASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 AC005183.1-201ENST00000603687 1979 ntBASIC3.58□□□□□ -1.84
TRIM43Q96BQ3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 MIR412-201ENST00000362142 91 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 Y_RNA.166-201ENST00000363730 102 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 SNORD113-7-201ENST00000363762 77 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 Y_RNA.414-201ENST00000384011 101 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 RNU6-1013P-201ENST00000384180 107 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 RN7SKP32-201ENST00000410167 303 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 RNU6-1148P-201ENST00000410992 104 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 AL365400.1-201ENST00000431854 640 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 AC093019.1-201ENST00000443135 252 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 AL590664.1-201ENST00000448065 339 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 RPL12P25-201ENST00000455592 494 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 AC022493.1-201ENST00000492984 337 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 GTF3AP2-201ENST00000557014 266 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 MIR4474-201ENST00000579189 78 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 AC005498.1-201ENST00000592125 465 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 CTHRC1P1-201ENST00000605383 469 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 FTX_3.1-201ENST00000610451 147 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 AC073073.2-201ENST00000609827 2578 ntBASIC3.57□□□□□ -1.84
TRIM43Q96BQ3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 RNU1-70P-201ENST00000362618 164 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 Y_RNA.167-201ENST00000363735 109 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 MTND3P8-201ENST00000412909 339 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 NDUFB4P5-201ENST00000415445 361 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 NDUFA5P4-201ENST00000436704 385 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 MTND4LP16-201ENST00000440828 295 ntBASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.56□□□□□ -1.84
TRIM43Q96BQ3 AC139453.3-201ENST00000493276 369 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms