Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 GNRHR2P1-201ENST00000555315 631 ntBASIC4.26□□□□□ -1.73
DDX1Q92499 AC011494.1-201ENST00000596454 237 ntBASIC4.26□□□□□ -1.73
DDX1Q92499 ATP5A1P2-202ENST00000616464 443 ntBASIC4.26□□□□□ -1.73
DDX1Q92499 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX1Q92499 AL606534.2-204ENST00000635008 178 ntBASIC4.26□□□□□ -1.73
DDX1Q92499 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
DDX1Q92499 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
DDX1Q92499 ZNF285B-201ENST00000561698 1767 ntBASIC4.26□□□□□ -1.73
DDX1Q92499 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
DDX1Q92499 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
DDX1Q92499 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
DDX1Q92499 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
DDX1Q92499 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
DDX1Q92499 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
DDX1Q92499 RNA5SP399-201ENST00000364003 117 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 RNU6-371P-201ENST00000364283 108 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 Y_RNA.288-201ENST00000364854 92 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 RNU6-95P-201ENST00000384697 107 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 RNU6-1197P-201ENST00000391183 107 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
DDX1Q92499 MIR1252-201ENST00000408861 65 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 RNU2-33P-201ENST00000410344 192 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 RPL21P90-201ENST00000415692 466 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.25□□□□□ -1.73
DDX1Q92499 AL672296.1-201ENST00000427780 2158 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 RPS15AP10-201ENST00000432472 382 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 PIGFP3-201ENST00000441918 722 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 NOTCH2P1-201ENST00000443481 624 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 OSTCP8-201ENST00000445117 448 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 AC110768.1-201ENST00000509222 400 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
DDX1Q92499 SCARNA16.2-201ENST00000516520 172 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
DDX1Q92499 AC131281.1-201ENST00000522984 164 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.25□□□□□ -1.73
DDX1Q92499 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.25□□□□□ -1.73
DDX1Q92499 MIR1273C-201ENST00000578669 77 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.25□□□□□ -1.73
DDX1Q92499 MIR548AC-201ENST00000585049 88 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 AC125232.2-201ENST00000592457 143 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 ATP1B3P1-201ENST00000605365 821 ntBASIC4.25□□□□□ -1.73
DDX1Q92499 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
DDX1Q92499 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
DDX1Q92499 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
DDX1Q92499 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
DDX1Q92499 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
DDX1Q92499 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
DDX1Q92499 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
DDX1Q92499 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
DDX1Q92499 Y_RNA.518-201ENST00000384552 113 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 SNORA41-201ENST00000384675 132 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 Y_RNA.562-201ENST00000384695 113 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 RPS4XP7-201ENST00000406274 780 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 Z99755.1-201ENST00000414048 380 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX1Q92499 RPLP0P7-201ENST00000416050 667 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 USMG5P1-201ENST00000425964 177 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 RPL23AP69-201ENST00000431134 458 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.24□□□□□ -1.73
DDX1Q92499 AC073910.1-201ENST00000445047 438 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 AL590664.1-201ENST00000448065 339 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 AL451050.1-201ENST00000450126 415 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX1Q92499 AL353752.1-201ENST00000454946 260 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 AC104472.2-201ENST00000469035 601 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 AC117503.1-201ENST00000472241 394 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 KC877373.1-201ENST00000479066 408 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.24□□□□□ -1.73
DDX1Q92499 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX1Q92499 RNU6-1023P-201ENST00000516137 106 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 RNU6-789P-201ENST00000517105 102 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 RNU6-1315P-201ENST00000517187 99 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX1Q92499 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX1Q92499 TRAV28-201ENST00000557548 323 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.24□□□□□ -1.73
DDX1Q92499 AC012119.1-201ENST00000603184 222 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX1Q92499 HMGB1P50-201ENST00000605814 607 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 AC098479.1-201ENST00000609225 154 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 MIR4727-201ENST00000622232 55 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 AC010615.1-201ENST00000594254 1764 ntBASIC4.24□□□□□ -1.73
DDX1Q92499 AC018555.1-201ENST00000567548 1980 ntBASIC4.23□□□□□ -1.73
DDX1Q92499 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX1Q92499 AC007785.2-201ENST00000598627 1916 ntBASIC4.23□□□□□ -1.73
DDX1Q92499 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX1Q92499 Y_RNA.210-201ENST00000364161 110 ntBASIC4.23□□□□□ -1.73
DDX1Q92499 MIR1251-201ENST00000408552 70 ntBASIC4.23□□□□□ -1.73
DDX1Q92499 RNU6-55P-201ENST00000411092 107 ntBASIC4.23□□□□□ -1.73
DDX1Q92499 AC093578.1-201ENST00000415219 368 ntBASIC4.23□□□□□ -1.73
DDX1Q92499 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX1Q92499 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.23□□□□□ -1.73
DDX1Q92499 MRPS18CP6-201ENST00000423587 223 ntBASIC4.23□□□□□ -1.73
DDX1Q92499 USP9YP30-201ENST00000430729 455 ntBASIC4.23□□□□□ -1.73
DDX1Q92499 RNU1-54P-201ENST00000517181 120 ntBASIC4.23□□□□□ -1.73
DDX1Q92499 AC087369.1-201ENST00000520775 996 ntBASIC4.23□□□□□ -1.73
DDX1Q92499 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.23□□□□□ -1.73
DDX1Q92499 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX1Q92499 MIR3128-201ENST00000581957 66 ntBASIC4.23□□□□□ -1.73
DDX1Q92499 Z98751.3-201ENST00000604447 521 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms