Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AL596327.1-201ENST00000603629 213 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AP000811.1-201ENST00000603803 651 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC106900.2-201ENST00000604994 317 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC007038.2-201ENST00000608095 740 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AL138880.2-201ENST00000616214 239 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 U8.1-201ENST00000362843 134 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 RNU6-433P-201ENST00000363216 104 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 MIR135A2-201ENST00000384854 100 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 RNU6-278P-201ENST00000390945 109 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 RNU2-62P-201ENST00000410868 191 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 Z99497.1-201ENST00000421282 135 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 MTND1P20-201ENST00000430341 950 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 RPS6P15-201ENST00000431996 751 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 PIGFP3-201ENST00000441918 722 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 MTATP6P30-201ENST00000443540 664 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC009237.8-201ENST00000445492 379 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 RPS3AP22-201ENST00000488297 769 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 HMGN1P7-201ENST00000491722 313 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC093809.1-201ENST00000509155 340 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 CDC42P4-201ENST00000510507 563 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC010486.3-201ENST00000511602 785 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC105914.1-201ENST00000511798 226 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 RNU1-61P-201ENST00000516107 151 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AL133153.1-201ENST00000557756 303 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC002400.1-201ENST00000569310 726 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AP001981.2-201ENST00000603241 418 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC092192.1-201ENST00000633154 1018 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 MIR4275-201ENST00000636486 87 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AL138713.1-201ENST00000624026 2130 ntBASIC1.74□□□□□ -2.13
SHROOM3Q8TF72 AC008568.2-201ENST00000623862 2313 ntBASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 AC093536.2-201ENST00000565257 1406 ntBASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 MTCYBP36-201ENST00000404146 440 ntBASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 AC005094.1-201ENST00000440420 368 ntBASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 MTCO3P45-201ENST00000443036 613 ntBASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 KATNBL1P3-201ENST00000443475 909 ntBASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 ZNF114P1-201ENST00000453500 292 ntBASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 MTND1P9-201ENST00000453775 944 ntBASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 AC009901.1-201ENST00000506703 541 ntBASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 OR5BM1P-201ENST00000512021 366 ntBASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 AC124947.2-202ENST00000552735 133 ntBASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 MIR3618-201ENST00000580330 88 ntBASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 MIR502-201ENST00000606349 86 ntBASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 AC091965.4-201ENST00000607691 587 ntBASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 AC010133.1-201ENST00000615809 842 ntBASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 AL513185.3-201ENST00000433335 1300 ntBASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 AC009902.3-201ENST00000606235 2172 ntBASIC1.73□□□□□ -2.13
SHROOM3Q8TF72 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 RNU5A-1-201ENST00000362698 116 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 MIR514A1-201ENST00000385133 98 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 SNORA26.8-201ENST00000391306 124 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AL109755.1-201ENST00000401791 649 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 Z85995.1-201ENST00000415547 335 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 UBE2FP1-201ENST00000416536 447 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AC092047.1-201ENST00000424997 240 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AL589872.1-201ENST00000426602 288 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AC008850.1-201ENST00000427546 362 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 ARPC3P1-201ENST00000437218 533 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 MTND4LP16-201ENST00000440828 295 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 MTATP6P26-201ENST00000445926 662 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 PPP1R2P5-201ENST00000457256 603 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 SNORD42A-201ENST00000459584 64 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 RPS29P12-201ENST00000460178 152 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 RNU6-798P-201ENST00000516912 103 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AC007115.1-201ENST00000546853 234 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 FAM60BP-201ENST00000578364 658 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 HMGN1P30-201ENST00000589286 268 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AC112187.2-201ENST00000604345 283 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AC126118.1-201ENST00000607744 628 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AC019226.1-201ENST00000625666 515 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 SDAD1P2-201ENST00000441308 2028 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 AC090740.1-201ENST00000623193 2262 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 DEFB108F-201ENST00000344638 222 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 RNU5A-8P-201ENST00000364102 114 ntBASIC1.72□□□□□ -2.13
SHROOM3Q8TF72 RNU6-741P-201ENST00000383889 107 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms