Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 AC107399.1-201ENST00000451226 265 ntBASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 HMGB1P30-201ENST00000492455 606 ntBASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 RPL31P61-201ENST00000496160 376 ntBASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 AC008716.1-201ENST00000511084 513 ntBASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 NDUFB4P9-201ENST00000511646 388 ntBASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 Y_RNA.682-201ENST00000516457 100 ntBASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 AC069113.1-201ENST00000517763 267 ntBASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 TRAV28-201ENST00000557548 323 ntBASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 AL359693.1-201ENST00000614959 2407 ntBASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 AL672296.1-201ENST00000427780 2158 ntBASIC4.12□□□□□ -1.75
SMC1BQ8NDV3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 Y_RNA.67-201ENST00000362870 100 ntBASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 Y_RNA.387-201ENST00000383918 102 ntBASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 Y_RNA.431-201ENST00000384086 102 ntBASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 RNU6-1197P-201ENST00000391183 107 ntBASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 VN1R36P-201ENST00000414936 291 ntBASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 AC236972.2-201ENST00000434979 310 ntBASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 FABP5P15-201ENST00000453566 214 ntBASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 AC233279.1-201ENST00000455300 423 ntBASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 Y_RNA.635-201ENST00000459041 101 ntBASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 HMGN1P13-201ENST00000505795 138 ntBASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 AC009901.1-201ENST00000506703 541 ntBASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 RNU6-1069P-201ENST00000516612 133 ntBASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 RNU6-566P-201ENST00000516790 107 ntBASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 AC090877.1-201ENST00000561418 344 ntBASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 MIR5692C1-201ENST00000585309 91 ntBASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 AL136360.1-201ENST00000503377 1900 ntBASIC4.11□□□□□ -1.75
SMC1BQ8NDV3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 RNU4-82P-201ENST00000362443 140 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 Y_RNA.474-201ENST00000384341 102 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 RNU6-1179P-201ENST00000384667 107 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 AC074085.1-201ENST00000413598 418 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 HMGB1P12-201ENST00000438594 598 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 Z82210.1-201ENST00000440037 231 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 RPL7P43-201ENST00000478876 753 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 RPS4XP13-201ENST00000483219 789 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 RPL30P5-201ENST00000494923 336 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 RNU6-323P-201ENST00000521915 107 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 AP003122.3-201ENST00000526316 255 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 AC084851.1-201ENST00000529105 249 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 MIR4790-201ENST00000577799 79 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 MIR4769-201ENST00000584126 77 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 MIR3672-201ENST00000584290 82 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 AC023043.2-201ENST00000589678 1026 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 AC073539.2-201ENST00000597113 165 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 AL353621.2-201ENST00000605340 133 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 SNORD39.4-201ENST00000620099 78 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.1□□□□□ -1.75
SMC1BQ8NDV3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 AL356274.2-201ENST00000624379 3752 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 FRG1CP-201ENST00000358464 769 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 Y_RNA.58-201ENST00000362807 102 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 Y_RNA.154-201ENST00000363624 102 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 Y_RNA.212-201ENST00000364177 102 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 RNY3P1-201ENST00000365085 102 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 RNY3-201ENST00000365484 102 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 RNU6-128P-201ENST00000383976 107 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 Y_RNA.490-201ENST00000384413 102 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 FAT1P1-201ENST00000406588 507 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 RNU6-1025P-201ENST00000410629 104 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 SNAP23P1-201ENST00000433229 246 ntBASIC4.09□□□□□ -1.75
SMC1BQ8NDV3 AL360271.2-201ENST00000447710 161 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms