Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS52Q8N1B4 AC010525.2-201ENST00000590920 195 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 AC078899.3-201ENST00000599065 212 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 AC136601.2-201ENST00000604356 474 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS52Q8N1B4 AC006504.8-201ENST00000621046 635 ntBASIC3.34□□□□□ -1.87
VPS52Q8N1B4 HSPA8P4-201ENST00000511877 1920 ntBASIC3.34□□□□□ -1.88
VPS52Q8N1B4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.34□□□□□ -1.88
VPS52Q8N1B4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
VPS52Q8N1B4 AC000403.1-201ENST00000613696 3585 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AC022336.2-201ENST00000568966 2538 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 Y_RNA.245-201ENST00000364493 95 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 SNORA14A-201ENST00000364773 135 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 RNY3P14-201ENST00000384309 102 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AL606923.1-201ENST00000406616 190 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 RPL32P35-201ENST00000415214 394 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 RPL7P10-201ENST00000417407 739 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AL592045.1-201ENST00000429867 352 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AC022018.1-201ENST00000430685 241 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AC009969.1-201ENST00000438726 172 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 MTND3P16-201ENST00000452205 344 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 RPL37P6-201ENST00000460682 294 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 RN7SL283P-201ENST00000489055 303 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 RNU1-143P-201ENST00000516296 146 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 RNA5SP290-201ENST00000517133 127 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AP003122.3-201ENST00000526316 255 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AC022690.1-201ENST00000526681 550 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AC084851.1-201ENST00000529105 249 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AL670379.4-201ENST00000605279 254 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AC008962.1-201ENST00000605729 304 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 U1.23-201ENST00000610293 146 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 RNU1-68P-201ENST00000615382 146 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 U1.39-201ENST00000621562 146 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AC027309.3-201ENST00000623419 351 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 AC091903.1-201ENST00000624322 454 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 Z99571.1-201ENST00000636677 394 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 CUL1P1-201ENST00000509510 2425 ntBASIC3.33□□□□□ -1.88
VPS52Q8N1B4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS52Q8N1B4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 NACAP2-201ENST00000318548 624 ntBASIC3.32□□□□□ -1.88
VPS52Q8N1B4 Y_RNA.157-201ENST00000363638 102 ntBASIC3.32□□□□□ -1.88
VPS52Q8N1B4 Y_RNA.231-201ENST00000364358 102 ntBASIC3.32□□□□□ -1.88
VPS52Q8N1B4 SNORA4.3-201ENST00000365564 137 ntBASIC3.32□□□□□ -1.88
VPS52Q8N1B4 RNU6-116P-201ENST00000384042 109 ntBASIC3.32□□□□□ -1.88
VPS52Q8N1B4 RNU6-1127P-201ENST00000384580 107 ntBASIC3.32□□□□□ -1.88
VPS52Q8N1B4 RPL21P3-201ENST00000395517 478 ntBASIC3.32□□□□□ -1.88
VPS52Q8N1B4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 AC146507.2-201ENST00000460608 476 ntBASIC3.32□□□□□ -1.88
VPS52Q8N1B4 AC104472.2-201ENST00000469035 601 ntBASIC3.32□□□□□ -1.88
VPS52Q8N1B4 MTCYBP18-201ENST00000501056 747 ntBASIC3.32□□□□□ -1.88
VPS52Q8N1B4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 RN7SKP272-201ENST00000516988 232 ntBASIC3.32□□□□□ -1.88
VPS52Q8N1B4 RNU6-1315P-201ENST00000517187 99 ntBASIC3.32□□□□□ -1.88
VPS52Q8N1B4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 AC006023.1-201ENST00000603944 259 ntBASIC3.32□□□□□ -1.88
VPS52Q8N1B4 AL591516.1-201ENST00000611326 274 ntBASIC3.32□□□□□ -1.88
VPS52Q8N1B4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 uc_338.34-201ENST00000617467 174 ntBASIC3.32□□□□□ -1.88
VPS52Q8N1B4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 AC090617.7-201ENST00000623952 126 ntBASIC3.32□□□□□ -1.88
VPS52Q8N1B4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 MTND4P14-201ENST00000435799 1354 ntBASIC3.32□□□□□ -1.88
VPS52Q8N1B4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
VPS52Q8N1B4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 CASC19-280ENST00000642102 1351 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 RNU6-371P-201ENST00000364283 108 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 RNU6-1027P-201ENST00000383998 107 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 RNU6-217P-201ENST00000384164 104 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 MIR325-201ENST00000385260 98 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 SNORD37.1-201ENST00000390968 65 ntBASIC3.31□□□□□ -1.88
VPS52Q8N1B4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS52Q8N1B4 AL592114.1-201ENST00000403842 483 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms