Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC018714.1-201ENST00000605028 208 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 AC090970.3-201ENST00000612566 866 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 AC007490.1-201ENST00000624321 703 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 AP003400.5-201ENST00000624827 617 ntBASIC1.94□□□□□ -2.1
CDKL3Q8IVW4 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 Y_RNA.46-201ENST00000362695 102 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 RNY4P24-201ENST00000362735 96 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 RNU6-1284P-201ENST00000363701 100 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 RNU6-512P-201ENST00000364438 103 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 AL512604.1-201ENST00000404812 257 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 NDUFS5P1-201ENST00000405668 289 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 RNU2-68P-201ENST00000410878 191 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 RNA5SP489-201ENST00000410986 109 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 ZNF90P2-204ENST00000419323 1075 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 AC003685.2-201ENST00000422795 395 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 TIMM9P1-201ENST00000436122 256 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 AL606662.1-201ENST00000445763 553 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 RPL37P6-201ENST00000460682 294 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 AC092436.1-201ENST00000506450 503 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 RNU2-44P-201ENST00000516795 194 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 AP001372.4-201ENST00000524889 472 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 AP000240.1-201ENST00000609910 452 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 DUSP12P1-201ENST00000612874 516 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 uc_338.14-201ENST00000613162 166 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 AC079416.3-201ENST00000624479 549 ntBASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.93□□□□□ -2.1
CDKL3Q8IVW4 ADAM3A-203ENST00000461344 2157 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 UBE2L2-201ENST00000254302 429 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 RNU6-1214P-201ENST00000363650 109 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 SNORA16.1-201ENST00000364597 132 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 AL030996.1-201ENST00000411430 235 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 AC098592.1-201ENST00000419352 333 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 XKRYP1-201ENST00000423438 492 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 AC104651.1-201ENST00000427559 735 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 RPL30P4-201ENST00000429309 333 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 GPM6BP2-201ENST00000432046 144 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 XKRYP2-201ENST00000432915 492 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 GPM6BP1-201ENST00000446387 144 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 MTND2P14-201ENST00000482139 351 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 AC107032.1-201ENST00000485945 480 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 HMGB3P17-201ENST00000504195 649 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 RNU6-237P-201ENST00000515985 71 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 AP003461.1-201ENST00000528866 78 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 ANP32BP3-201ENST00000559213 706 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 KC877982.1-201ENST00000602313 470 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 AL391813.2-201ENST00000609113 322 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 AC005296.1-201ENST00000616145 209 ntBASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CDKL3Q8IVW4 AC008555.8-201ENST00000623602 2168 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 AL359854.1-201ENST00000614203 1594 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 Y_RNA.97-201ENST00000363094 102 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 RNU6-486P-201ENST00000363116 107 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 RNU6-701P-201ENST00000384059 107 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 U6atac.2-201ENST00000408644 118 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 RNU4-26P-201ENST00000410270 107 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 ELOCP17-201ENST00000414751 326 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 HMGB1P27-201ENST00000431429 603 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 RPL36AP53-201ENST00000432891 316 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 GDI2P2-201ENST00000445131 608 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 HMGN2P10-201ENST00000448085 265 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 FABP5P15-201ENST00000453566 214 ntBASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CDKL3Q8IVW4 RPL23AP42-201ENST00000471152 471 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms